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Comparison · Infra & APIs

ncmR vs stochvol

A side-by-side editorial comparison of ncmR and stochvol — release velocity, themes, recent moves, and the top alternatives to consider.

ncmR vs stochvol: at a glance

FeaturencmRstochvol
SectorInfra & APIsInfra & APIs
Velocity score0.00.0
Sparks · 30d00
Top themesmicrobiome, ecology, neutral-community-model, shinybayesian-inference, stochastic-volatility, mcmc, rcpp
Last editorial update1h ago1h ago
WebsiteVisit →Visit →

What is ncmR?

Three weeks from first CRAN submission to a point-and-click neutral community model

ncmR fits the neutral community model to microbiome and ecological abundance data. The whole feed is three weeks long: fit_ncm() and summary methods at 0.1.0 on 1 April, a scatter plot with fitted curve and confidence interval at 0.2.0, then a Shiny application wrapping both at 0.3.0, then a row-name bugfix. It is a new package moving fast in its first month.

Read the full ncmR trajectory →

What is stochvol?

A Bayesian volatility sampler in its maintenance decade, paying for its own speed

stochvol runs MCMC for stochastic volatility models, with a C++ sampler underneath an R interface. Five years of releases in this window contain no new models: the work is compiler and dependency compatibility, CRAN check notes, and a steady trickle of corrections to the sampler itself. Its methodological milestone, the Journal of Statistical Software paper, is recorded in a 2021 tag.

Read the full stochvol trajectory →

ncmR vs stochvol: editorial side-by-side

N
ncmR
INFRA · APIS
0.0

Three weeks from first CRAN submission to a point-and-click neutral community model

◆ Current state

ncmR fits the neutral community model to microbiome and ecological abundance data. The whole feed is three weeks long: fit_ncm() and summary methods at 0.1.0 on 1 April, a scatter plot with fitted curve and confidence interval at 0.2.0, then a Shiny application wrapping both at 0.3.0, then a row-name bugfix. It is a new package moving fast in its first month.

◆ Where it's heading

The direction is toward users who do not write R. Version 0.2.0 added plotting, 0.3.0 wrapped fitting and plotting in Shiny modules, and the same release deleted the Unicode plotting helpers introduced one version earlier because the dependency they existed for was removed. That willingness to throw away a week-old API suggests the surface is still being negotiated rather than settled.

◆ Prediction

With a fitting module and a plotting module in the app, the remaining gap is getting results back out — export of fitted parameters or figures from the Shiny session. The bugfix at 0.3.1 was in file upload, which is where a GUI's problems usually start.

S
stochvol
INFRA · APIS
0.0

A Bayesian volatility sampler in its maintenance decade, paying for its own speed

◆ Current state

stochvol runs MCMC for stochastic volatility models, with a C++ sampler underneath an R interface. Five years of releases in this window contain no new models: the work is compiler and dependency compatibility, CRAN check notes, and a steady trickle of corrections to the sampler itself. Its methodological milestone, the Journal of Statistical Software paper, is recorded in a 2021 tag.

◆ Where it's heading

This is what a finished computational package looks like. The formula interface arrived at 3.1.0 and nothing has been added since; what changes is the ground underneath — RcppArmadillo major versions, UBSan checks, error-handling conventions moving from Rf_error to Rcpp::stop for correct memory management. The recurring pattern worth watching is that several releases fix real errors in the sampler's proposal distributions, found by users and by CRAN's own instrumented checks rather than by the maintainer.

◆ Prediction

Nothing in these notes suggests new methodology. Expect the next release when RcppArmadillo or a CRAN check flavour forces one, and treat any bug report against the samplers as the more consequential event.

Alternatives to ncmR and stochvol

Other Infra & APIs products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either ncmR or stochvol.

See all ncmR alternatives → · See all stochvol alternatives →

Recent activity from ncmR and stochvol

Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.

  1. 4mo agoncmRRow names preserved during file upload conversion
  2. 4mo agoncmRA Shiny app for fitting and plotting neutral community models
  3. 4mo agoncmRScatter plot with fitted curve and confidence interval
  4. 4mo agoncmRFirst CRAN submission: neutral community model fitting in R
  5. 5mo agostochvolSampler crash with constant parameters fixed, plus RcppArmadillo 15
  6. 1y agostochvolTwo CRAN check notes cleared
  7. 1y agostochvolProposal variance corrected in the centered parameterisation
  8. 2y agostochvolCRAN stochvol 3.2.4
  9. 2y agostochvolRolling-window indexing and inverse gamma prior validation fixed
  10. 3y agostochvolCore C++ sampler routines exported for reuse

Frequently asked questions

What is the difference between ncmR and stochvol?

They serve adjacent needs but don't currently overlap on shipped themes. ncmR and stochvol are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.

Is ncmR better than stochvol?

Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. ncmR and stochvol are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Infra & APIs products to evaluate alongside.

What are the best alternatives to ncmR?

Top ncmR alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "ncmR alternatives" section above for the current picks, or visit /alternatives/ncmr for the full list with editorial commentary on each.

What are the best alternatives to stochvol?

Top stochvol alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "stochvol alternatives" section above for the current picks, or visit /alternatives/stochvol for the full list with editorial commentary on each.