pr2database
The protist reference database keeps widening past the rRNA gene it was built on.
A side-by-side editorial comparison of ncmR and states — release velocity, themes, recent moves, and the top alternatives to consider.
Three weeks from first CRAN submission to a point-and-click neutral community model
ncmR fits the neutral community model to microbiome and ecological abundance data. The whole feed is three weeks long: fit_ncm() and summary methods at 0.1.0 on 1 April, a scatter plot with fitted curve and confidence interval at 0.2.0, then a Shiny application wrapping both at 0.3.0, then a row-name bugfix. It is a new package moving fast in its first month.
State-panel tooling holding steady since its 2020 data and ergonomics release.
states supplies the Gleditsch & Ward and Correlates of War state lists and the tooling to turn them into country-year or country-month panels, with plot_missing() for coverage checks. The substantive work landed in 2020; the releases since are compatibility fixes against ggplot2, dplyr, readr and testthat. The most recent entry is a single test repair.
ncmR fits the neutral community model to microbiome and ecological abundance data. The whole feed is three weeks long: fit_ncm() and summary methods at 0.1.0 on 1 April, a scatter plot with fitted curve and confidence interval at 0.2.0, then a Shiny application wrapping both at 0.3.0, then a row-name bugfix. It is a new package moving fast in its first month.
The direction is toward users who do not write R. Version 0.2.0 added plotting, 0.3.0 wrapped fitting and plotting in Shiny modules, and the same release deleted the Unicode plotting helpers introduced one version earlier because the dependency they existed for was removed. That willingness to throw away a week-old API suggests the surface is still being negotiated rather than settled.
With a fitting module and a plotting module in the app, the remaining gap is getting results back out — export of fitted parameters or figures from the Shiny session. The bugfix at 0.3.1 was in file upload, which is where a GUI's problems usually start.
states supplies the Gleditsch & Ward and Correlates of War state lists and the tooling to turn them into country-year or country-month panels, with plot_missing() for coverage checks. The substantive work landed in 2020; the releases since are compatibility fixes against ggplot2, dplyr, readr and testthat. The most recent entry is a single test repair.
The package has reached the point where its own data and API are settled and the release trigger is upstream churn in the tidyverse. What movement there is goes toward making the two state lists interchangeable, with the microstates coding carried from G&W onto the COW data as the clearest example, rather than toward new datasets.
The next release is most likely another compatibility pass; a data refresh would be the signal that the package is active again.
Other Infra & APIs products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either ncmR or states.
The protist reference database keeps widening past the rRNA gene it was built on.
Composable aligned layouts, rebuilt on S7 while ggplot2 4.0 lands underneath.
Conservation planning absorbs the literature's target-setting rules as code.
Joint species distribution models in Gibbs-sampled C++, quiet since 2023.
An ecosystem model starts tracking carbon isotopes and land-use change.
Ten years in, US mapping splits its data out and finally adds Puerto Rico.
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
They serve adjacent needs but don't currently overlap on shipped themes. ncmR and states are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. ncmR and states are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Infra & APIs products to evaluate alongside.
Top ncmR alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "ncmR alternatives" section above for the current picks, or visit /alternatives/ncmr for the full list with editorial commentary on each.
Top states alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "states alternatives" section above for the current picks, or visit /alternatives/states for the full list with editorial commentary on each.