EvoPhylo
EvoPhylo added BEAST2 alongside MrBayes, then went quiet for two years.
Comparison · Analytics
mutagen vs xts
A side-by-side editorial comparison of mutagen and xts — release velocity, themes, recent moves, and the top alternatives to consider.
mutagen vs xts: at a glance
What is mutagen?
A young package porting Stata's egen row-wise helpers to the tidyverse, one function per release
mutagen provides row-wise column-generation helpers for R data frames in the spirit of Stata's egen — gen_rowmean(), gen_rowsum(), gen_rowsd(), gen_rownonmiss() and about a dozen siblings. It reached 0.5.0 within three months of its first release, adding two or three functions each time. The most recent release adds gen_coldiff() and renames two functions to fit the naming scheme.
What is xts?
xts is finished software, and its releases now track R's C API more than user requests.
xts is the time-series class underpinning much of R's financial stack, and it behaves like infrastructure: the visible releases are bug fixes, plotting repairs and conformance work. A recurring thread is removing calls R no longer considers public — SET_TYPEOF in 0.14.0 and 0.14.1, then ATTRIB() and SET_ATTRIB() in 0.14.2. Feature additions are rare and small, the last cluster being open-ended time-of-day subsetting and na.fill performance in 0.13.0.
mutagen vs xts: editorial side-by-side
mutagen
0.0ANALYTICS
A young package porting Stata's egen row-wise helpers to the tidyverse, one function per release
◆ Current state
mutagen provides row-wise column-generation helpers for R data frames in the spirit of Stata's egen — gen_rowmean(), gen_rowsum(), gen_rowsd(), gen_rownonmiss() and about a dozen siblings. It reached 0.5.0 within three months of its first release, adding two or three functions each time. The most recent release adds gen_coldiff() and renames two functions to fit the naming scheme.
◆ Where it's heading
The package is filling out a known surface rather than discovering one: the reference implementation exists in Stata, so development is a matter of working through the list. Alongside that, the naming convention is still settling — gen_rowmatch became gen_rowany, gen_percent became gen_colpercent, gen_na_listcol became gen_listcol_na — which is normal for a pre-1.0 package but means callers should expect further renames. Contributions are arriving from several first-time contributors.
◆ Prediction
The gen_col* prefix has only two members against a dozen gen_row* functions, so column-wise coverage is the obvious gap; expect it to fill before the naming stabilises for a 1.0.
xts
0.0ANALYTICS
xts is finished software, and its releases now track R's C API more than user requests.
◆ Current state
xts is the time-series class underpinning much of R's financial stack, and it behaves like infrastructure: the visible releases are bug fixes, plotting repairs and conformance work. A recurring thread is removing calls R no longer considers public — SET_TYPEOF in 0.14.0 and 0.14.1, then ATTRIB() and SET_ATTRIB() in 0.14.2. Feature additions are rare and small, the last cluster being open-ended time-of-day subsetting and na.fill performance in 0.13.0.
◆ Where it's heading
Two forces drive releases. R core keeps narrowing its public C API, and xts keeps rewriting internals to stay inside it; separately, ggplot-era changes elsewhere in the ecosystem surface plotting bugs that get fixed one report at a time. Nearly every entry credits an outside reporter, which is what maintenance of a dependency this widely used looks like.
◆ Prediction
Further C API conformance work is the safest expectation, since two consecutive releases have each removed a different non-API entry point and R has continued tightening that boundary.
Alternatives to mutagen and xts
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either mutagen or xts.
treespace
treespace ships once every year or two, and only when CRAN or a user forces it.
Rpath
Rpath 1.1.0 learns to read Ecopath's own files, easing migration off the desktop tool.
TAF
TAF keeps turning ICES stock assessments into reproducible, dependency-pinned projects.
parallelDist
parallelDist is in pure preservation mode — one build fix every few years.
cairo
Cairo finally catches R's graphics engine, all the way to GE API 16.
Recent activity from mutagen and xts
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 5mo agoxtsmulti.panel plots beyond 8 columns; SET_TYPEOF removed from C
- 5mo agoxtsATTRIB removed from C; rollapply.xts accepts vector widths
- 8mo agomutagengen_coldiff() added; two functions renamed for consistency
- 9mo agomutagengen_rowsum() and gen_rowsd() added
- 9mo agomutagengen_rownonmiss() and gen_rowall() added
- 9mo agomutagenRow mean, median and missingness helpers; gen_rowmatch renamed
- 11mo agomutagenFirst release with the row-wise gen_* family
- 2y agoxtsMulti-panel event lines; first SET_TYPEOF replacement
- 2y agoxtstclass changes now alter index values; log-scale y-axis added
- 3y agoxtsUpdate path for pre-0.12 objects missing index attributes
- 3y agoxtsOpen-ended time-of-day subsetting; fast scalar na.fill
Frequently asked questions
What is the difference between mutagen and xts?
They serve adjacent needs but don't currently overlap on shipped themes. mutagen and xts are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is mutagen better than xts?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. mutagen and xts are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to mutagen?
Top mutagen alternatives in Analytics are ranked by recent ship velocity. Browse the "mutagen alternatives" section above for the current picks, or visit /alternatives/mutagen-r for the full list with editorial commentary on each.
What are the best alternatives to xts?
Top xts alternatives in Analytics are ranked by recent ship velocity. Browse the "xts alternatives" section above for the current picks, or visit /alternatives/xts-r for the full list with editorial commentary on each.