rnaturalearth
rnaturalearth finished its sp exit and is now optimising how the data actually arrives.
Comparison · Analytics
mlr3proba vs rotl
A side-by-side editorial comparison of mlr3proba and rotl — release velocity, themes, recent moves, and the top alternatives to consider.
mlr3proba vs rotl: at a glance
What is mlr3proba?
mlr3proba is shedding weight as its survival work moves into sibling packages
mlr3proba provides probabilistic supervised learning for mlr3 — survival analysis, density estimation, and the measures that go with them. Recent releases are almost entirely upkeep: a distr6 fork to work around an upstream problem, an ooplah fix, a predict-type correction, and registration in mlr_reflections$loaded_packages. The one deletion is telling, with LearnerDensPenalized removed after pendensity left CRAN.
What is rotl?
rotl's whole release history is keeping name matching honest against a moving taxonomy.
Nearly every entry concerns `tnrs_match_names()`, the function that maps user-supplied names onto Open Tree taxonomy ids. 3.1.0 changed which taxon wins a multi-way match — highest matching score rather than lowest OTT id, reversing the rule 3.0.4 introduced. 3.0.12 defaulted `context_name` to 'All life' so a context inferred from the first name could not silently skew later ones. 3.0.11 made a total failure to match return an empty tibble with a warning instead of an error. The rest are small fixes tracking Open Tree API changes.
mlr3proba vs rotl: editorial side-by-side
mlr3proba
0.0ANALYTICS
mlr3proba is shedding weight as its survival work moves into sibling packages
◆ Current state
mlr3proba provides probabilistic supervised learning for mlr3 — survival analysis, density estimation, and the measures that go with them. Recent releases are almost entirely upkeep: a distr6 fork to work around an upstream problem, an ooplah fix, a predict-type correction, and registration in mlr_reflections$loaded_packages. The one deletion is telling, with LearnerDensPenalized removed after pendensity left CRAN.
◆ Where it's heading
The package is being pared back rather than extended. Its README now points at survdistr and mlr3cmprsk as matured alternatives for parts of what it covers, which reads as scope being handed off, while the Cox proportional-hazards autoplot arrived from mlr3viz in the other direction. Several fixes exist to route around dependencies that broke or disappeared, which is the recurring cost of building on a long chain of specialized CRAN packages.
◆ Prediction
The dependency churn suggests more consolidation — further reliance on survdistr and mlr3cmprsk, and more learners retired when the package underneath them goes unmaintained.
rotl
0.0ANALYTICS
rotl's whole release history is keeping name matching honest against a moving taxonomy.
◆ Current state
Nearly every entry concerns `tnrs_match_names()`, the function that maps user-supplied names onto Open Tree taxonomy ids. 3.1.0 changed which taxon wins a multi-way match — highest matching score rather than lowest OTT id, reversing the rule 3.0.4 introduced. 3.0.12 defaulted `context_name` to 'All life' so a context inferred from the first name could not silently skew later ones. 3.0.11 made a total failure to match return an empty tibble with a warning instead of an error. The rest are small fixes tracking Open Tree API changes.
◆ Where it's heading
The recurring problem is ambiguity: names match several taxa, and the package has changed its tie-breaking rule twice while making failures and edge cases return predictable objects rather than errors. Nothing here expands what rotl can retrieve; it makes what it retrieves reproducible. The feed also stops in mid-2023, so the package appears dormant.
◆ Prediction
Nothing in the window suggests new capability. If a release comes, the pattern says it will follow an Open Tree API change or another matching-behaviour correction.
Alternatives to mlr3proba and rotl
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either mlr3proba or rotl.
writexl
writexl spent nine years refusing to do formatting, then shipped all of it in 2.0.0.
rgbif
rgbif is steadily pushing users off paged searching and onto real downloads.
rstanarm
rstanarm is community-maintained now, tracking Stan and lme4 rather than adding models.
taxa
taxa started a ground-up rewrite in 2021 and has published almost nothing since.
taxize
taxize spends its releases absorbing other people's API changes, one dead source at a time.
See all mlr3proba alternatives → · See all rotl alternatives →
Recent activity from mlr3proba and rotl
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 2mo agomlr3probamlr3proba 0.8.10 registers itself in the mlr3 loaded-packages registry
- 4mo agomlr3probamlr3proba 0.8.9 drops LearnerDensPenalized after pendensity left CRAN
- 5mo agomlr3probamlr3proba 0.8.8
- 5mo agomlr3probamlr3proba 0.8.7
- 9mo agomlr3probamlr3proba 0.8.5
- 10mo agomlr3probamlr3proba 0.8.4 takes over the Cox proportional-hazards autoplot
- 3y agorotlrotl 3.1.0 matches on score instead of lowest OTT id
- 4y agorotlrotl 3.0.12 defaults matching context to All life
- 5y agorotlrotl 3.0.11 returns empty tibble when no names match
- 6y agorotlrotl 3.0.10 tracks Open Tree API updates
- 7y agorotlrotl 3.0.9 tracks Open Tree API updates
- 7y agorotlrotl 3.0.7 updates vignette for TNRS endpoint change
Frequently asked questions
What is the difference between mlr3proba and rotl?
They serve adjacent needs but don't currently overlap on shipped themes. mlr3proba and rotl are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is mlr3proba better than rotl?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. mlr3proba and rotl are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to mlr3proba?
Top mlr3proba alternatives in Analytics are ranked by recent ship velocity. Browse the "mlr3proba alternatives" section above for the current picks, or visit /alternatives/mlr3proba for the full list with editorial commentary on each.
What are the best alternatives to rotl?
Top rotl alternatives in Analytics are ranked by recent ship velocity. Browse the "rotl alternatives" section above for the current picks, or visit /alternatives/rotl for the full list with editorial commentary on each.