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Comparison · Infra & APIs
MIC vs onemap
A side-by-side editorial comparison of MIC and onemap — release velocity, themes, recent moves, and the top alternatives to consider.
MIC vs onemap: at a glance
What is MIC?
An antimicrobial testing package cut its genomic half loose to become one thing well.
MIC analyses and validates antimicrobial minimum inhibitory concentration data. Version 2.0.0 removed every genomic function and ported them to a separate package, faLearn, leaving MIC focused on concentration analysis and method validation. The result needs fewer dependencies and no longer requires compilation, which is a meaningful install-time change for a clinical microbiology audience.
What is onemap?
A genetic-mapping mainstay that now points new users toward MAPpoly at load time
OneMap constructs genetic linkage maps for experimental crosses, and its 3.x line turned it into a hub in a wider mapping toolchain: export functions for VIEWpoly and QTLpoly, summary and interactive ordering functions adapted from MAPpoly, and retention of reference and alternative allele information from imported VCFs. The most recent release, 3.2.0 in January 2025, adds an announcement about MAPpoly to the README and the package load message, fixes a subscript-out-of-bounds warning in rf_2pts and refreshes vignettes and tests.
MIC vs onemap: editorial side-by-side
MIC
0.0INFRA · APIS
An antimicrobial testing package cut its genomic half loose to become one thing well.
◆ Current state
MIC analyses and validates antimicrobial minimum inhibitory concentration data. Version 2.0.0 removed every genomic function and ported them to a separate package, faLearn, leaving MIC focused on concentration analysis and method validation. The result needs fewer dependencies and no longer requires compilation, which is a meaningful install-time change for a clinical microbiology audience.
◆ Where it's heading
The split was announced a release before it happened, with the genomic functions deprecated in 1.2.0 and the destination named. Around that, the substantive work has been on censoring: MIC values are reported with inequality signs, and 1.1.0 then 1.2.0 built out increasingly precise handling of them, separating less-than-or-equal from strictly-less-than and adding tolerance arguments to the comparison and agreement functions. That is the package's real subject matter, and shedding the genomic code is what makes room for it.
◆ Prediction
With the scope settled, expect continued work on validation semantics and on the AMR package interoperability the notes already track. The relationship between MIC and faLearn is the thing to watch, since users of the removed functions now have to install both.
onemap
0.0INFRA · APIS
A genetic-mapping mainstay that now points new users toward MAPpoly at load time
◆ Current state
OneMap constructs genetic linkage maps for experimental crosses, and its 3.x line turned it into a hub in a wider mapping toolchain: export functions for VIEWpoly and QTLpoly, summary and interactive ordering functions adapted from MAPpoly, and retention of reference and alternative allele information from imported VCFs. The most recent release, 3.2.0 in January 2025, adds an announcement about MAPpoly to the README and the package load message, fixes a subscript-out-of-bounds warning in rf_2pts and refreshes vignettes and tests.
◆ Where it's heading
Versions 3.0.0 and 3.1.0 were driven by a benchmarking preprint on genotyping-by-sequencing best practice, and their content follows directly: marker filtering from two-point estimates, memory reduction after filtering, and optimisation of find_bins and map_avoid_unlinked. What has happened since is signposting rather than capability — a package that spent two releases integrating with MAPpoly now tells users about it every time it loads. The pre-3.0 tags are backfilled, with versions 2.3 through 2.7 sharing a single August 2021 timestamp, so their order carries no information.
◆ Prediction
The load-message announcement suggests attention is flowing toward the MAPpoly side of the toolchain; expect maintenance and compatibility releases here rather than new mapping algorithms.
Alternatives to MIC and onemap
Other Infra & APIs products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either MIC or onemap.
tealeaves
A leaf-temperature model that finished its job in 2020 and has stayed finished
Infisical
A credential platform assembled two or three pull requests at a time, never a headline
SigNoz
Search without knowing the field — SigNoz keeps lowering the cost of not knowing your schema
nmfspalette
A NOAA Fisheries colour palette that ships when the branding guide changes
logbin
Relative-risk regression that converges where glm fails, under an unreadable tag order
Recent activity from MIC and onemap
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 8mo agoMICGenomic functions removed and ported to faLearn ⚡
- 9mo agoMICGenomic functions deprecated; censoring distinguishes leq and geq
- 1y agoMICessential_agreement rebuilt around explicit censoring control
- 1y agoonemapMAPpoly announcement added to README and load message
- 3y agoonemapExports to VIEWpoly and QTLpoly; marker ordering and map summaries
- 3y agoonemapTwo-point marker filtering and memory reduction
- 4y agoonemapPSOCK and FORK parallelization choice; vcfR as an import
- 5y agoonemaphmm=FALSE option for ordering algorithms
- 5y agoonemapMDSMap dependency removed
Frequently asked questions
What is the difference between MIC and onemap?
They serve adjacent needs but don't currently overlap on shipped themes. MIC and onemap are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is MIC better than onemap?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. MIC and onemap are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Infra & APIs products to evaluate alongside.
What are the best alternatives to MIC?
Top MIC alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "MIC alternatives" section above for the current picks, or visit /alternatives/mic for the full list with editorial commentary on each.
What are the best alternatives to onemap?
Top onemap alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "onemap alternatives" section above for the current picks, or visit /alternatives/onemap for the full list with editorial commentary on each.