jSDM
Joint species distribution models in Gibbs-sampled C++, quiet since 2023.
A side-by-side editorial comparison of LightLogR and mice — release velocity, themes, recent moves, and the top alternatives to consider.
Wearable light-exposure data gets circular time and versioned device formats
LightLogR ingests recordings from wearable light loggers and optical radiation dosimeters, and its release notes are lopsided: four of the six most recent tags are one-line merge stubs while 0.10.0 carries several thousand words. That release is where the package sits — dataset-wide summary tables, a version argument on the importers, and time of day handled as a circular quantity.
mice can finally predict, not just estimate, from multiply imputed data.
mice is the reference implementation of multiple imputation by chained equations, and the default answer to missing data in R. The releases here follow a consistent shape: one or two substantive additions per version, most contributed by outside authors, plus fixes to methods that have been in the package for years. The current 3.19.0 adds predict_mi(), which pools predictions across imputations under Rubin's rules and can return prediction intervals.
LightLogR ingests recordings from wearable light loggers and optical radiation dosimeters, and its release notes are lopsided: four of the six most recent tags are one-line merge stubs while 0.10.0 carries several thousand words. That release is where the package sits — dataset-wide summary tables, a version argument on the importers, and time of day handled as a circular quantity.
The arc runs from reading files off N devices toward modelling the awkward shapes of chronobiology data. Circular conversion lets bedtimes crossing midnight average correctly; remove_partial_data() can demand a minimum duration rather than a fraction of a known total; add_states() takes Interval objects so sleep-scoring output flows straight in. The device side hardens in parallel — supported_versions() exists because a VEET firmware release changed the file format mid-life.
The version switch currently covers VEET and a German-locale Actiwatch Spectrum; more device-format generations behind that same argument are the obvious continuation as manufacturers revise exports. The named milestones (Civil Dawn, then Sunrise) suggest the next substantive release will be another themed one rather than a steady drip.
mice is the reference implementation of multiple imputation by chained equations, and the default answer to missing data in R. The releases here follow a consistent shape: one or two substantive additions per version, most contributed by outside authors, plus fixes to methods that have been in the package for years. The current 3.19.0 adds predict_mi(), which pools predictions across imputations under Rubin's rules and can return prediction intervals.
Two things are happening. The imputation method catalogue keeps widening — lasso variants, multivariate PMM, categorical PMM via canonical correlation — while the pooling side is being extended past its original purpose, first to synthetic data, now to predictions on held-out sets. That second thread points at predictive modelling workflows rather than the inferential ones mice was built for. Meanwhile the maintainers keep finding consequential old bugs: the augment() ordered-factor defect in 3.18.0 had been silently degrading ordinal imputations for years.
predict_mi() is framed around evaluating predictive performance on test sets, and the ignore argument added in 3.12.0 already exists to hold out rows from the imputation model. Expect the next work to join those up into a fuller train/test story for imputed data, since the pieces are now in place but not yet connected.
Other Infra & APIs products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either LightLogR or mice.
Joint species distribution models in Gibbs-sampled C++, quiet since 2023.
An ecosystem model starts tracking carbon isotopes and land-use change.
Ten years in, US mapping splits its data out and finally adds Puerto Rico.
Fitness-tracking analysis in slow maintenance, still absorbing upstream breakage.
State-panel tooling holding steady since its 2020 data and ergonomics release.
Five years of compiler and CRAN fixes on a capture-recapture package.
See all LightLogR alternatives → · See all mice alternatives →
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
They serve adjacent needs but don't currently overlap on shipped themes. LightLogR and mice are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. LightLogR and mice are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Infra & APIs products to evaluate alongside.
Top LightLogR alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "LightLogR alternatives" section above for the current picks, or visit /alternatives/lightlogr for the full list with editorial commentary on each.
Top mice alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "mice alternatives" section above for the current picks, or visit /alternatives/mice for the full list with editorial commentary on each.