STACAS
Single-cell batch correction that learned to use cell labels, then spent three releases chasing Seurat.
Comparison · Analytics
incase vs mmconvert
A side-by-side editorial comparison of incase and mmconvert — release velocity, themes, recent moves, and the top alternatives to consider.
Shared themes:r-package
incase vs mmconvert: at a glance
What is incase?
A safer case_when that keeps hardening its guarantees while realigning to tidyverse naming.
incase supplies in_case(), switch_case(), grep_case() and fn_case() as vectorised recoding functions in the dplyr::case_when idiom, with _fct and _list variants that return factors or lists instead of forcing atomic type conversion. The 0.4.0 release deprecates the undotted preserve, default and ordered arguments in favour of dotted forms, starting a removal clock, and adds .exhaustive to error on unmatched inputs.
What is mmconvert?
A single-purpose mouse map interpolator that solved its problem in 2023 and has coasted since
mmconvert does one thing: interpolate between GRCm39 physical positions and the revised Cox genetic map for mouse MUGA array markers. The substantive work all landed in a burst across 2021-2023 — the initial function, the GRCm39 annotation dataset, cross2_to_grcm39(), the recomputed Cox maps and their smoothed replacement. Everything since is upkeep: a warning-message fix in 0.12, and 0.14 is a test adjustment to silence a CRAN Note with no code change at all.
incase vs mmconvert: editorial side-by-side
incase
0.0ANALYTICS
A safer case_when that keeps hardening its guarantees while realigning to tidyverse naming.
◆ Current state
incase supplies in_case(), switch_case(), grep_case() and fn_case() as vectorised recoding functions in the dplyr::case_when idiom, with _fct and _list variants that return factors or lists instead of forcing atomic type conversion. The 0.4.0 release deprecates the undotted preserve, default and ordered arguments in favour of dotted forms, starting a removal clock, and adds .exhaustive to error on unmatched inputs.
◆ Where it's heading
The arc is consistently toward catching recoding mistakes at the call site rather than letting them pass silently. Early releases broadened how a match can be expressed — pattern matching, function application, factor and list returns. Recent work has shifted to guarantees about the result: correct factor level ordering relative to .default, and now an exhaustiveness check. Notably 0.4.0 reverses the 0.3.2 decision to accept arguments with or without dots, trading that flexibility for namespace safety against user-supplied case names.
◆ Prediction
The deprecation warnings introduced in 0.4.0 point to a follow-up release that removes the undotted arguments outright. Whether .exhaustive eventually becomes the default is unclear from these entries.
mmconvert
0.0ANALYTICS
A single-purpose mouse map interpolator that solved its problem in 2023 and has coasted since
◆ Current state
mmconvert does one thing: interpolate between GRCm39 physical positions and the revised Cox genetic map for mouse MUGA array markers. The substantive work all landed in a burst across 2021-2023 — the initial function, the GRCm39 annotation dataset, cross2_to_grcm39(), the recomputed Cox maps and their smoothed replacement. Everything since is upkeep: a warning-message fix in 0.12, and 0.14 is a test adjustment to silence a CRAN Note with no code change at all.
◆ Where it's heading
The package has reached the natural end state of a reference-data converter — the reference data stopped moving, so the package stopped moving. Releases now arrive roughly annually and exist to keep CRAN checks green. The 0.14 release shipped the same day as sibling qtl2convert 0.36, confirming these are batch maintenance passes across the maintainer's packages rather than independent development.
◆ Prediction
Without a new mouse genome build or a revised Cox map, the next release is likely another CRAN-check accommodation rather than new functionality.
Alternatives to incase and mmconvert
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either incase or mmconvert.
ggtrace
A debugger for ggplot2's internals, hardening its grip as the internals it traces keep moving.
kde1d
A univariate density estimator that added zero-inflated data and reopened its C++ API to do it.
svines
Stationary vine copulas for time series, released in lockstep with the rest of Nagler's vine stack.
gghighlight
A single-purpose ggplot2 extension that has spent six years tracking ggplot2 instead of growing.
rtrek
A Star Trek data package that became a Memory Alpha web client and has been patching scrapers ever since.
See all incase alternatives → · See all mmconvert alternatives →
Recent activity from incase and mmconvert
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 1mo agommconvertTest adjustment to clear a CRAN Note
- 11mo agoincaseDotted arguments and an .exhaustive matching check
- 1y agommconvertFixes a malformed warning message in mmconvert()
- 2y agoincaseDotted and undotted arguments both accepted
- 3y agommconvertOmits X chromosome positions for sex-averaged and male maps
- 3y agommconvertCRAN release adds chromosome lengths and smoothed Cox maps
- 3y agommconvertRecomputed Cox genetic maps and combined-array support
- 4y agommconvertRepoints data sources from master to main branches
- 5y agoincaseFix NULL return when no condition matches
- 5y agoincaseFactor and list return families arrive
- 5y agoincaseDrop unused stats import to clear a check NOTE
- 5y agoincasePattern and function-based matching families added
Frequently asked questions
What is the difference between incase and mmconvert?
Both compete on the same themes — r-package — within Analytics. incase and mmconvert are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is incase better than mmconvert?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. incase and mmconvert are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to incase?
Top incase alternatives in Analytics are ranked by recent ship velocity. Browse the "incase alternatives" section above for the current picks, or visit /alternatives/incase for the full list with editorial commentary on each.
What are the best alternatives to mmconvert?
Top mmconvert alternatives in Analytics are ranked by recent ship velocity. Browse the "mmconvert alternatives" section above for the current picks, or visit /alternatives/mmconvert for the full list with editorial commentary on each.