qqman
The Manhattan-plot package for GWAS results, finished and dormant since 2017.
Comparison · Analytics
gwasvcf vs tern.rbmi
A side-by-side editorial comparison of gwasvcf and tern.rbmi — release velocity, themes, recent moves, and the top alternatives to consider.
gwasvcf vs tern.rbmi: at a glance
What is gwasvcf?
gwasvcf has stopped adding features and now just keeps proxy matching from failing.
gwasvcf reads and queries GWAS summary statistics stored as VCF, with LD proxy lookup as its most-used entry point. Every release in the visible window is a fix, and all but one land in or around proxy_match(). The last functional addition was gwasvcf_to_summaryset() in 0.1.2, which hands data to gwasglue2 rather than doing new work here.
What is tern.rbmi?
Reference-based multiple imputation tables, shipping only what CRAN checks demand.
tern.rbmi renders the output of {rbmi} reference-based multiple imputation analyses into tern tables for clinical reporting. Its three most recent releases exist to satisfy CRAN: restricting vignette builds to gcc, adding V8 to Suggests, and a plain resubmission. No user-facing functionality has changed in the visible window, and the three older entries now backfilled are version-bump automation.
gwasvcf vs tern.rbmi: editorial side-by-side
gwasvcf
0.0ANALYTICS
gwasvcf has stopped adding features and now just keeps proxy matching from failing.
◆ Current state
gwasvcf reads and queries GWAS summary statistics stored as VCF, with LD proxy lookup as its most-used entry point. Every release in the visible window is a fix, and all but one land in or around proxy_match(). The last functional addition was gwasvcf_to_summaryset() in 0.1.2, which hands data to gwasglue2 rather than doing new work here.
◆ Where it's heading
The package is in custodial maintenance inside the MRC IEU OpenGWAS stack, and its releases are reactive: each one answers a specific user-reported failure, credited to the reporter. The 0.1.6 pattern is telling — rather than replace the proxy VCF construction, it keeps the original path and adds a fallback only for inputs that fail, so existing results are left bit-for-bit unchanged.
◆ Prediction
Expect further narrow robustness fixes to proxy_match() driven by user-reported VCF shapes; nothing in the entries suggests new analysis capability is being built here rather than in gwasglue2.
tern.rbmi
0.0ANALYTICS
Reference-based multiple imputation tables, shipping only what CRAN checks demand.
◆ Current state
tern.rbmi renders the output of {rbmi} reference-based multiple imputation analyses into tern tables for clinical reporting. Its three most recent releases exist to satisfy CRAN: restricting vignette builds to gcc, adding V8 to Suggests, and a plain resubmission. No user-facing functionality has changed in the visible window, and the three older entries now backfilled are version-bump automation.
◆ Where it's heading
This is a thin adapter package and behaves like one — it moves when CRAN or an upstream dependency forces it to. Between 2022 and 2024 the feed shows only version bumps, and the 2025 releases are packaging concerns rather than analysis changes. The newly surfaced 2022 entries reinforce rather than change that reading.
◆ Prediction
Expect the next release to be triggered by a CRAN check failure or an {rbmi} update rather than by new tabulation features.
Alternatives to gwasvcf and tern.rbmi
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either gwasvcf or tern.rbmi.
constants
The R package for CODATA constants rebuilt its symbol table on NIST's naming so future updates stop being hand work.
austraits
The R client for AusTraits spends its releases chasing the dataset it reads.
ggdemetra
A ggplot2 layer for seasonal adjustment output, filling in one plot type at a time.
fossilsim
A fossil-record simulator that quietly grew a trait-evolution engine.
tern.mmrm
An MMRM tabulation package that has published nothing since its 2024 CRAN releases.
See all gwasvcf alternatives → · See all tern.rbmi alternatives →
Recent activity from gwasvcf and tern.rbmi
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 5mo agogwasvcfproxy_match() gains a fallback VCF construction path
- 8mo agogwasvcfproxy_match() handles multi-sample VCFs
- 1y agotern.rbmiVignette built only under gcc
- 1y agogwasvcfsqlite3 declared in SystemRequirements
- 1y agogwasvcfMessage fix in get_ld_proxies()
- 1y agotern.rbmiV8 added to Suggests
- 1y agotern.rbmiCRAN resubmission with dependency and workflow updates
- 2y agogwasvcfgwasvcf_to_summaryset() bridges to gwasglue2
- 3y agotern.rbmiAutomated release commit for 0.1.1
- 4y agotern.rbmiDevelopment version bump to 0.1.0.9004
- 4y agotern.rbmiCI automation commit, no release content
Frequently asked questions
What is the difference between gwasvcf and tern.rbmi?
They serve adjacent needs but don't currently overlap on shipped themes. gwasvcf and tern.rbmi are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is gwasvcf better than tern.rbmi?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. gwasvcf and tern.rbmi are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to gwasvcf?
Top gwasvcf alternatives in Analytics are ranked by recent ship velocity. Browse the "gwasvcf alternatives" section above for the current picks, or visit /alternatives/gwasvcf for the full list with editorial commentary on each.
What are the best alternatives to tern.rbmi?
Top tern.rbmi alternatives in Analytics are ranked by recent ship velocity. Browse the "tern.rbmi alternatives" section above for the current picks, or visit /alternatives/tern-rbmi for the full list with editorial commentary on each.