tern.rbmi
Reference-based multiple imputation tables, shipping only what CRAN checks demand.
Comparison · Analytics
grex vs vellum
A side-by-side editorial comparison of grex and vellum — release velocity, themes, recent moves, and the top alternatives to consider.
grex vs vellum: at a glance
What is grex?
grex is a lookup table with a version number — it ships when the annotation moves.
grex converts the deprecated Ensembl gene IDs found in GTEx data into current gene symbols and identifiers, using org.Hs.eg.db as its reference. Its value is entirely in that bundled reference data, so a release either refreshes the mapping or does nothing to it. The 2025 release does nothing to it: GitHub Actions for the docs site, a check-note fix, and a smaller vignette.
What is vellum?
vellum's bugs are now found by using it, not testing it — the downstream grammar is doing the QA.
The rendering engine shipped nine releases in the two weeks around the end of July, six of them on a single day. Almost every entry is a correctness fix in a capability that worked when drawn and failed when measured, or worked in isolation and failed in composition. The release notes are unusually forensic: each one states the mechanism, the observable symptom, and why the fix mirrors the draw path rather than reimplementing it.
grex vs vellum: editorial side-by-side
grex
0.0ANALYTICS
grex is a lookup table with a version number — it ships when the annotation moves.
◆ Current state
grex converts the deprecated Ensembl gene IDs found in GTEx data into current gene symbols and identifiers, using org.Hs.eg.db as its reference. Its value is entirely in that bundled reference data, so a release either refreshes the mapping or does nothing to it. The 2025 release does nothing to it: GitHub Actions for the docs site, a check-note fix, and a smaller vignette.
◆ Where it's heading
The annotation refreshes stopped. Between 2017 and 2019 the package tracked org.Hs.eg.db through four versions and added the GTEx V7 identifier set; since then the reference has stood still while the releases turned to packaging. That gap matters more here than it would elsewhere — a stale mapping table silently returns outdated symbols rather than failing, so the package's core asset ages invisibly.
◆ Prediction
Nothing in these entries signals a planned data refresh, and the six-year pattern suggests the next release will again be infrastructure. Users needing current annotations should check which org.Hs.eg.db version is bundled rather than assume the version number reflects it.
vellum
5.0ANALYTICS
vellum's bugs are now found by using it, not testing it — the downstream grammar is doing the QA.
◆ Current state
The rendering engine shipped nine releases in the two weeks around the end of July, six of them on a single day. Almost every entry is a correctness fix in a capability that worked when drawn and failed when measured, or worked in isolation and failed in composition. The release notes are unusually forensic: each one states the mechanism, the observable symptom, and why the fix mirrors the draw path rather than reimplementing it.
◆ Where it's heading
The pivotal detail is stated outright in 0.6.3 — the first bug in the series found by using the engine from vellumplot rather than testing it in isolation. Every release since names the downstream as the source: the contrast rule's false positives, the lint rules that fired on all five sample plots, the keyed roundrect batch. A rendering engine with a real grammar built on top of it is now getting the integration coverage that unit tests structurally cannot provide, and the fixes are converging on one theme: the measurement path and the draw path must not drift.
◆ Prediction
Expect the release rate to fall as the vellumplot integration surface is exhausted, with remaining work concentrated in the lint rule set now that it is meant to gate builds rather than just inform.
Alternatives to grex and vellum
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either grex or vellum.
tern.mmrm
An MMRM tabulation package that has published nothing since its 2024 CRAN releases.
ggmagnify
A single-purpose ggplot2 inset tool, refining the same three arguments.
symengine
An R symbolic-maths binding whose changelog is really the C++ core's release notes.
gtfstools
gtfstools stopped guarding its own object model and started accepting everyone else's.
quantities
The glue package that makes R carry units and uncertainty through the same calculation.
Recent activity from grex and vellum
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 11d agovellumLinter grows to 20 rules and stops firing on every plot
- 13d agovellumAnimated SVGs no longer blink once and vanish or play in reverse
- 14d agovellumPick table now reports device pixels instead of two coordinate systems
- 15d agovellumContrast rule stops flagging every plot; gridlines become PDF artifacts
- 15d agovellumgrobwidth and grobheight now measure wrapped text, not the unwrapped line
- 15d agovellumKeyed roundrect becomes a real batch after downstream integration exposes it
- 1y agogrexgrex 1.9.1: pkgdown on Actions, smaller vignette
- 7y agogrexgrex 1.9 refreshes the reference to org.Hs.eg.db 3.8.2
- 8y agogrexgrex 1.8 adds GTEx V7 IDs, updates to org.Hs.eg.db 3.6.0
- 8y agogrexgrex 1.7 updates the reference to org.Hs.eg.db 3.4.2
- 8y agogrexgrex 1.6 drops Google Fonts from vignettes
- 9y agogrexgrex 1.5 adds a pkgdown site and refreshes the reference
Frequently asked questions
What is the difference between grex and vellum?
They serve adjacent needs but don't currently overlap on shipped themes. vellum is currently shipping more aggressively (velocity 5.0 vs 0.0), with 0 editorial sparks in the last 30 days against 0. See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is grex better than vellum?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. vellum is currently shipping more aggressively (velocity 5.0 vs 0.0), with 0 editorial sparks in the last 30 days against 0. For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to grex?
Top grex alternatives in Analytics are ranked by recent ship velocity. Browse the "grex alternatives" section above for the current picks, or visit /alternatives/grex-r for the full list with editorial commentary on each.
What are the best alternatives to vellum?
Top vellum alternatives in Analytics are ranked by recent ship velocity. Browse the "vellum alternatives" section above for the current picks, or visit /alternatives/vellum-r for the full list with editorial commentary on each.