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ggeffects vs rotl

A side-by-side editorial comparison of ggeffects and rotl — release velocity, themes, recent moves, and the top alternatives to consider.

ggeffects vs rotl: at a glance

Featureggeffectsrotl
SectorAnalyticsAnalytics
Velocity score0.00.0
Sparks · 30d00
Top themesmarginal-effects, r-stats, statistics, breaking-changesopen-tree-of-life, taxonomic-matching, reproducibility, api-tracking
Last editorial update4h ago1h ago
WebsiteVisit →Visit →

What is ggeffects?

ggeffects hands its contrast engine to modelbased and keeps the interface

ggeffects computes and plots marginal effects for a long tail of R model classes. Its recent line has two threads: steadily broadening model support and argument surface, and repeatedly absorbing breaking changes from the packages it computes on top of. In 2.2.0 it stopped absorbing them and delegated test_predictions() and johnson_neyman() to modelbased instead.

Read the full ggeffects trajectory →

What is rotl?

rotl's whole release history is keeping name matching honest against a moving taxonomy.

Nearly every entry concerns `tnrs_match_names()`, the function that maps user-supplied names onto Open Tree taxonomy ids. 3.1.0 changed which taxon wins a multi-way match — highest matching score rather than lowest OTT id, reversing the rule 3.0.4 introduced. 3.0.12 defaulted `context_name` to 'All life' so a context inferred from the first name could not silently skew later ones. 3.0.11 made a total failure to match return an empty tibble with a warning instead of an error. The rest are small fixes tracking Open Tree API changes.

Read the full rotl trajectory →

ggeffects vs rotl: editorial side-by-side

G
ggeffects
ANALYTICS
0.0

ggeffects hands its contrast engine to modelbased and keeps the interface

◆ Current state

ggeffects computes and plots marginal effects for a long tail of R model classes. Its recent line has two threads: steadily broadening model support and argument surface, and repeatedly absorbing breaking changes from the packages it computes on top of. In 2.2.0 it stopped absorbing them and delegated test_predictions() and johnson_neyman() to modelbased instead.

◆ Where it's heading

The package is settling into a front-end role — a consistent predict_response() interface over other people's estimation engines — rather than owning the computation itself. The 2.x releases also show a pattern of removing deprecated arguments and clarifying mixed-model semantics, so the interface is being tightened as the backend is outsourced.

◆ Prediction

Expect the features lost in the modelbased handover to return as that package's contrast and slope estimation matures, rather than being reimplemented locally.

R
rotl
ANALYTICS
0.0

rotl's whole release history is keeping name matching honest against a moving taxonomy.

◆ Current state

Nearly every entry concerns `tnrs_match_names()`, the function that maps user-supplied names onto Open Tree taxonomy ids. 3.1.0 changed which taxon wins a multi-way match — highest matching score rather than lowest OTT id, reversing the rule 3.0.4 introduced. 3.0.12 defaulted `context_name` to 'All life' so a context inferred from the first name could not silently skew later ones. 3.0.11 made a total failure to match return an empty tibble with a warning instead of an error. The rest are small fixes tracking Open Tree API changes.

◆ Where it's heading

The recurring problem is ambiguity: names match several taxa, and the package has changed its tie-breaking rule twice while making failures and edge cases return predictable objects rather than errors. Nothing here expands what rotl can retrieve; it makes what it retrieves reproducible. The feed also stops in mid-2023, so the package appears dormant.

◆ Prediction

Nothing in the window suggests new capability. If a release comes, the pattern says it will follow an Open Tree API change or another matching-behaviour correction.

Alternatives to ggeffects and rotl

Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either ggeffects or rotl.

See all ggeffects alternatives → · See all rotl alternatives →

Recent activity from ggeffects and rotl

Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.

  1. 1y agoggeffectsggeffects delegates contrasts and slopes to modelbased
  2. 1y agoggeffectsFive focal terms and formula-based contrast tests
  3. 1y agoggeffectsMixed-model predictions split type from interval
  4. 1y agoggeffectsBias correction for back-transformed mixed-model predictions
  5. 1y agoggeffectsSupport for WeightIt model classes
  6. 2y agoggeffectsglmgee support and vcov controls for ggemmeans()
  7. 3y agorotlrotl 3.1.0 matches on score instead of lowest OTT id
  8. 4y agorotlrotl 3.0.12 defaults matching context to All life
  9. 5y agorotlrotl 3.0.11 returns empty tibble when no names match
  10. 6y agorotlrotl 3.0.10 tracks Open Tree API updates
  11. 7y agorotlrotl 3.0.9 tracks Open Tree API updates
  12. 7y agorotlrotl 3.0.7 updates vignette for TNRS endpoint change

Frequently asked questions

What is the difference between ggeffects and rotl?

They serve adjacent needs but don't currently overlap on shipped themes. ggeffects and rotl are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.

Is ggeffects better than rotl?

Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. ggeffects and rotl are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.

What are the best alternatives to ggeffects?

Top ggeffects alternatives in Analytics are ranked by recent ship velocity. Browse the "ggeffects alternatives" section above for the current picks, or visit /alternatives/ggeffects for the full list with editorial commentary on each.

What are the best alternatives to rotl?

Top rotl alternatives in Analytics are ranked by recent ship velocity. Browse the "rotl alternatives" section above for the current picks, or visit /alternatives/rotl for the full list with editorial commentary on each.