HydroPortailStats
France's national flood statistics, ported out of Fortran and into R.
Comparison · Infra & APIs
ggdist vs pathfindR
A side-by-side editorial comparison of ggdist and pathfindR — release velocity, themes, recent moves, and the top alternatives to consider.
Shared themes:r-package
ggdist vs pathfindR: at a glance
What is ggdist?
The grammar of uncertainty visualization, now drawing the uncertainty in its own estimates.
ggdist supplies ggplot2 with a compositional vocabulary for distributions — slabs, intervals, dotplots and the sub-geometries that combine them. The last three years moved it from a drawing library to an estimation library: bounded density estimation with Sheather-Jones bandwidth became the default, weights propagate through every density, interval and point summary, and blurred dotplots render Monte Carlo standard error as visual fuzz. The 2025 release rounds this out with per-geometry thickness subscales and settable global defaults.
What is pathfindR?
pathfindR dropped Java from its subnetwork search and rebuilt it in C++
pathfindR runs active-subnetwork-oriented pathway enrichment on gene expression results. Version 3.0.0 re-implemented the greedy, simulated-annealing and genetic search algorithms in R and C++ through Rcpp, removing the Java dependency the package had carried since its early releases, and renamed three exported functions in the process. The two patches since have been consolidation: 3.0.1 fixed signed integer overflow in the new C++ hash function flagged by gcc-UBSAN and clang-UBSAN on CRAN, and 3.0.2 repaired tests after a companion data package changed a dataset structure.
ggdist vs pathfindR: editorial side-by-side
ggdist
0.0INFRA · APIS
The grammar of uncertainty visualization, now drawing the uncertainty in its own estimates.
◆ Current state
ggdist supplies ggplot2 with a compositional vocabulary for distributions — slabs, intervals, dotplots and the sub-geometries that combine them. The last three years moved it from a drawing library to an estimation library: bounded density estimation with Sheather-Jones bandwidth became the default, weights propagate through every density, interval and point summary, and blurred dotplots render Monte Carlo standard error as visual fuzz. The 2025 release rounds this out with per-geometry thickness subscales and settable global defaults.
◆ Where it's heading
Two threads run in parallel and keep converging. One is statistical: pluggable density estimators arrived first, then became the default, then gained weights and quantile histograms. The other is compositional: sub-geometries acquired their own guides, then their own scales, so a slab's thickness axis is now a first-class annotated dimension. Cadence has stretched from twice-yearly to roughly annual, with the recent work tightening existing surface rather than opening new.
◆ Prediction
Subguides gained subscales a release later, so the remaining asymmetry is in the sub-geometry system rather than the statistics; expect the next release to continue that fill-in work.
pathfindR
0.0INFRA · APIS
pathfindR dropped Java from its subnetwork search and rebuilt it in C++
◆ Current state
pathfindR runs active-subnetwork-oriented pathway enrichment on gene expression results. Version 3.0.0 re-implemented the greedy, simulated-annealing and genetic search algorithms in R and C++ through Rcpp, removing the Java dependency the package had carried since its early releases, and renamed three exported functions in the process. The two patches since have been consolidation: 3.0.1 fixed signed integer overflow in the new C++ hash function flagged by gcc-UBSAN and clang-UBSAN on CRAN, and 3.0.2 repaired tests after a companion data package changed a dataset structure.
◆ Where it's heading
The dependency surface has been shrinking for two years and Java was the last heavy one. 2.4.0 removed magick, KEGGgraph and KEGGREST by moving KEGG visualization onto ggkegg; 2.7.0 pushed org.Hs.eg.db from Imports to Suggests under CRAN policy, with functions degrading to defaults when it is absent; 3.0.0 finished the job on the search engine itself. The corresponding cost is now visible in 3.0.1: owning the algorithms in C++ means owning their undefined-behaviour reports too.
◆ Prediction
Expect the near-term releases to keep hardening the Rcpp search code against sanitizer findings and to verify GA parity with the legacy JAR, since 3.0.0 claimed numerically identical results only for the greedy and simulated-annealing methods.
Alternatives to ggdist and pathfindR
Other Infra & APIs products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either ggdist or pathfindR.
bsvarSIGNs
Sign, zero and narrative restrictions brought into the bsvars ecosystem.
estimatr
Fast design-based estimators for experiments, coasting on CRAN patches.
ipaddress
IP address vectors for R that hit 1.0 and then went quiet.
ltertools
A column-key toolkit for stitching decades of ecological field data into one table.
finnts
Microsoft's automated forecasting framework, still mostly a one-maintainer effort.
See all ggdist alternatives → · See all pathfindR alternatives →
Recent activity from ggdist and pathfindR
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 1mo agopathfindRTest fixes after a companion data package changed a dataset
- 1mo agopathfindRUndefined-behaviour fixes harden the new C++ search engine
- 1mo agopathfindRActive subnetwork search re-implemented in C++, Java dependency removed ⚡
- 7mo agopathfindRHuman annotation database moves from Imports to Suggests
- 7mo agopathfindRGraceful handling for gene-set URL failures
- 1y agopathfindRKappa matrix fix for the igraph update
- 1y agoggdistPer-geometry thickness subscales and settable defaults
- 2y agoggdistBlurred dotplots draw Monte Carlo error; weights reach every estimator ⚡
- 2y agoggdistC++ dotplot binning and safer bandwidth fallbacks
- 3y agoggdistBounded density becomes the default; existing charts change ⚡
- 3y agoggdistCategorical distributions, hex layouts, pluggable density estimators
- 4y agoggdistComputed variables shared across sub-geometries
Frequently asked questions
What is the difference between ggdist and pathfindR?
Both compete on the same themes — r-package — within Infra & APIs. ggdist and pathfindR are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is ggdist better than pathfindR?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. ggdist and pathfindR are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Infra & APIs products to evaluate alongside.
What are the best alternatives to ggdist?
Top ggdist alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "ggdist alternatives" section above for the current picks, or visit /alternatives/ggdist for the full list with editorial commentary on each.
What are the best alternatives to pathfindR?
Top pathfindR alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "pathfindR alternatives" section above for the current picks, or visit /alternatives/pathfindr for the full list with editorial commentary on each.