qqman
The Manhattan-plot package for GWAS results, finished and dormant since 2017.
Comparison · Analytics
fossilsim vs stockplotr
A side-by-side editorial comparison of fossilsim and stockplotr — release velocity, themes, recent moves, and the top alternatives to consider.
fossilsim vs stockplotr: at a glance
What is fossilsim?
A fossil-record simulator that quietly grew a trait-evolution engine.
FossilSim is a mature R package for simulating fossil records on phylogenetic trees, and its release cadence reflects that: long gaps punctuated by a single capability addition. The last four releases span three years, with the most recent being a compatibility sync to its companion Shiny front-end rather than new functionality. The core simulation surface has been stable since 2022.
What is stockplotr?
A stock-assessment plotting package is growing a table engine to match its figures.
stockplotr generates the figures and, since 0.8.0-beta, the tables that go into NOAA fisheries stock assessment reports. The 0.8.0 release swapped the table backend from flextable to gt and shipped table_landings() as the first table function; 0.9.0 exported it with an interface deliberately mirroring the plot functions. Alongside that, convert_output() moved in from the sister package asar so model output is standardized here rather than upstream.
fossilsim vs stockplotr: editorial side-by-side
fossilsim
0.0ANALYTICS
A fossil-record simulator that quietly grew a trait-evolution engine.
◆ Current state
FossilSim is a mature R package for simulating fossil records on phylogenetic trees, and its release cadence reflects that: long gaps punctuated by a single capability addition. The last four releases span three years, with the most recent being a compatibility sync to its companion Shiny front-end rather than new functionality. The core simulation surface has been stable since 2022.
◆ Where it's heading
The arc runs from sampling mechanics toward simulating what the organisms actually were. Version 2.2.0 taught the package to handle occurrence data for occurrence birth-death models; 2.3.0 then added trait simulation under Mk, BM and OU, which is a different kind of output than fossil ages. Since then the work has been maintenance and keeping the FossilSimShiny GUI in step, suggesting the authors consider the current model set feature-complete.
◆ Prediction
The pairing of the 2.3.3 release with a FossilSimShiny version bump points to the GUI, not the library, as where the next visible work lands. The entries do not show enough activity to predict a specific new model family.
stockplotr
0.0ANALYTICS
A stock-assessment plotting package is growing a table engine to match its figures.
◆ Current state
stockplotr generates the figures and, since 0.8.0-beta, the tables that go into NOAA fisheries stock assessment reports. The 0.8.0 release swapped the table backend from flextable to gt and shipped table_landings() as the first table function; 0.9.0 exported it with an interface deliberately mirroring the plot functions. Alongside that, convert_output() moved in from the sister package asar so model output is standardized here rather than upstream.
◆ Where it's heading
The package is consolidating the whole report-artifact pipeline in one place: standardize model output, then emit both figures and tables from the same long-format frame. Pulling convert_output() out of asar because stockplotr depended on it more heavily is the clearest signal of where the center of gravity now sits. Everything is still tagged beta, and the plot function count is growing faster than the table one.
◆ Prediction
More table_* functions built on the gt foundation are the obvious next step, matching the existing plot_* set; the 0.9.0 notes describe table_landings() as the first of a revamped family rather than a one-off.
Alternatives to fossilsim and stockplotr
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either fossilsim or stockplotr.
constants
The R package for CODATA constants rebuilt its symbol table on NIST's naming so future updates stop being hand work.
austraits
The R client for AusTraits spends its releases chasing the dataset it reads.
ggdemetra
A ggplot2 layer for seasonal adjustment output, filling in one plot type at a time.
tern.rbmi
Reference-based multiple imputation tables, shipping only what CRAN checks demand.
tern.mmrm
An MMRM tabulation package that has published nothing since its 2024 CRAN releases.
See all fossilsim alternatives → · See all stockplotr alternatives →
Recent activity from fossilsim and stockplotr
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 5mo agostockplotrtable_landings() exported with a plot-like interface
- 6mo agostockplotrTable engine moved to gt; first table function ships ⚡
- 7mo agostockplotrconvert_output() migrated in from asar
- 8mo agostockplotrFour new assessment figures; process_data() auto-indexing
- 2y agofossilsimCompatibility bump for FossilSimShiny 1.1.2
- 4y agofossilsimBug fixes and documentation cleanup
- 4y agofossilsimTrait simulation arrives: Mk, BM and OU models ⚡
- 5y agofossilsimOccurrence handling for the occurrence birth-death model
Frequently asked questions
What is the difference between fossilsim and stockplotr?
They serve adjacent needs but don't currently overlap on shipped themes. fossilsim and stockplotr are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is fossilsim better than stockplotr?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. fossilsim and stockplotr are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to fossilsim?
Top fossilsim alternatives in Analytics are ranked by recent ship velocity. Browse the "fossilsim alternatives" section above for the current picks, or visit /alternatives/fossilsim-r for the full list with editorial commentary on each.
What are the best alternatives to stockplotr?
Top stockplotr alternatives in Analytics are ranked by recent ship velocity. Browse the "stockplotr alternatives" section above for the current picks, or visit /alternatives/stockplotr-r for the full list with editorial commentary on each.