STACAS
Single-cell batch correction that learned to use cell labels, then spent three releases chasing Seurat.
Comparison · Analytics
flashlight vs sdsfun
A side-by-side editorial comparison of flashlight and sdsfun — release velocity, themes, recent moves, and the top alternatives to consider.
Shared themes:r-package
flashlight vs sdsfun: at a glance
What is flashlight?
flashlight hit 1.0 by giving away its SHAP feature and making most of its API internal.
flashlight computes model-agnostic interpretability output — variable importance, partial dependence and effect profiles, breakdown plots — for fitted models in R. Version 1.0.0 in October 2025 executed a contraction announced two years earlier: add_shap() is deprecated in favour of the separate kernelshap and fastshap packages, type = "shap" is gone from every light_* function that accepted it, and eight previously exported helpers became internal. The release also restored compatibility with ggplot2 v4.
What is sdsfun?
A spatial-statistics utility package exists to be depended on, and is built accordingly.
sdsfun collects spatial data science utilities — neighbour lists, spatial constrained clustering, discretization, dummy variable generation, geographical detector statistics and projection helpers — with the computationally heavy parts implemented in Rcpp. It was assembled quickly across late 2024, adding a function set roughly every three weeks, and has slowed since to a couple of releases a year. The most recent work is corrective: no longer initializing the RNG state at load, fixing matrix inputs misread as vectors, and clearing an Armadillo deprecation.
flashlight vs sdsfun: editorial side-by-side
flashlight
0.0ANALYTICS
flashlight hit 1.0 by giving away its SHAP feature and making most of its API internal.
◆ Current state
flashlight computes model-agnostic interpretability output — variable importance, partial dependence and effect profiles, breakdown plots — for fitted models in R. Version 1.0.0 in October 2025 executed a contraction announced two years earlier: add_shap() is deprecated in favour of the separate kernelshap and fastshap packages, type = "shap" is gone from every light_* function that accepted it, and eight previously exported helpers became internal. The release also restored compatibility with ggplot2 v4.
◆ Where it's heading
The package is narrowing rather than growing, and doing it on a published schedule — 0.9.0 listed the breaking changes, 1.0.0 applied them essentially unchanged. Handing SHAP computation to dedicated packages leaves flashlight as an effects-and-profiles visualization layer rather than an all-purpose interpretability toolkit. Removing the ability to rename result columns via options() points the same way: fewer configuration surfaces, a smaller contract to maintain.
◆ Prediction
With the deprecation list from 0.9.0 now fully applied, the next releases most likely remove the functions currently deprecated rather than adding capability, and continue tracking ggplot2. The entries show no new analysis method in progress.
sdsfun
0.0ANALYTICS
A spatial-statistics utility package exists to be depended on, and is built accordingly.
◆ Current state
sdsfun collects spatial data science utilities — neighbour lists, spatial constrained clustering, discretization, dummy variable generation, geographical detector statistics and projection helpers — with the computationally heavy parts implemented in Rcpp. It was assembled quickly across late 2024, adding a function set roughly every three weeks, and has slowed since to a couple of releases a year. The most recent work is corrective: no longer initializing the RNG state at load, fixing matrix inputs misread as vectors, and clearing an Armadillo deprecation.
◆ Where it's heading
This is infrastructure for a family of packages rather than an end-user tool, and the changelog says so directly — functions were added to support gdverse and sesp, and moran_test was migrated in from geocomplexity. That migration pattern is the defining move: capability consolidates here so the downstream packages can share it instead of each carrying its own copy. Growth has slowed as that consolidation completed, leaving correctness and dependency upkeep.
◆ Prediction
Given the package moves when its dependents need something, the next release most likely brings in another shared function or responds to a downstream requirement rather than following its own plan. Armadillo and CRAN check changes remain the reliable source of maintenance work.
Alternatives to flashlight and sdsfun
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either flashlight or sdsfun.
ggtrace
A debugger for ggplot2's internals, hardening its grip as the internals it traces keep moving.
kde1d
A univariate density estimator that added zero-inflated data and reopened its C++ API to do it.
svines
Stationary vine copulas for time series, released in lockstep with the rest of Nagler's vine stack.
gghighlight
A single-purpose ggplot2 extension that has spent six years tracking ggplot2 instead of growing.
rtrek
A Star Trek data package that became a Memory Alpha web client and has been patching scrapers ever since.
See all flashlight alternatives → · See all sdsfun alternatives →
Recent activity from flashlight and sdsfun
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 10mo agoflashlightSHAP handed off to kernelshap as the public API shrinks ⚡
- 10mo agosdsfunPackage load stops touching the RNG state
- 1y agosdsfunUnified partial correlation testing and head/tails discretization
- 1y agosdsfunMissing-value handling added to linear trend removal
- 1y agosdsfunCovariate-based detrending and long-to-matrix spatial reshaping
- 1y agosdsfunSpatially constrained hierarchical clustering and SPADE estimation
- 1y agosdsfunFast geodetector q-value estimator added
- 3y agoflashlightBreaking changes for 1.0.0 announced two years ahead
- 4y agoflashlightMaintenance release covering package generation
- 5y agoflashlightggpubr dependency removed
Frequently asked questions
What is the difference between flashlight and sdsfun?
Both compete on the same themes — r-package — within Analytics. flashlight and sdsfun are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is flashlight better than sdsfun?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. flashlight and sdsfun are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to flashlight?
Top flashlight alternatives in Analytics are ranked by recent ship velocity. Browse the "flashlight alternatives" section above for the current picks, or visit /alternatives/flashlight for the full list with editorial commentary on each.
What are the best alternatives to sdsfun?
Top sdsfun alternatives in Analytics are ranked by recent ship velocity. Browse the "sdsfun alternatives" section above for the current picks, or visit /alternatives/sdsfun for the full list with editorial commentary on each.