← Back to home
Comparison · Analytics

fastglm vs sccore

A side-by-side editorial comparison of fastglm and sccore — release velocity, themes, recent moves, and the top alternatives to consider.

Shared themes:r-package

fastglm vs sccore: at a glance

Featurefastglmsccore
SectorAnalyticsAnalytics
Velocity score0.00.0
Sparks · 30d00
Top themesstatistical-computing, generalized-linear-models, cpp, r-packagesingle-cell, bioinformatics, r-package, cran-compliance
Last editorial update3h ago43m ago
WebsiteVisit →Visit →

What is fastglm?

A fast GLM solver stops being one function and becomes a count-model family

fastglm ran C++ IRLS for standard generalized linear models for six years with almost no releases. In May 2026 it added three top-level model types — negative binomial with jointly estimated dispersion, hurdle, and zero-inflated — each with the entire fitting driver in C++ rather than an R loop around a C++ kernel. The following release generalised Firth bias reduction to every standard family across dense, sparse and streaming backends.

Read the full fastglm trajectory →

What is sccore?

Shared plumbing for the Kharchenko single-cell stack, updated once a year

sccore is the utility layer under the Kharchenko lab's single-cell packages — embedding plots, dot plots, parallel apply helpers and distance metrics that the downstream tools depend on rather than a tool researchers drive directly. The recent releases fix the Jensen-Shannon distance computation between matrix columns and add optional OpenMP support to the RcppArmadillo build. Cadence is roughly one CRAN release a year.

Read the full sccore trajectory →

fastglm vs sccore: editorial side-by-side

F
fastglm
ANALYTICS
0.0

A fast GLM solver stops being one function and becomes a count-model family

◆ Current state

fastglm ran C++ IRLS for standard generalized linear models for six years with almost no releases. In May 2026 it added three top-level model types — negative binomial with jointly estimated dispersion, hurdle, and zero-inflated — each with the entire fitting driver in C++ rather than an R loop around a C++ kernel. The following release generalised Firth bias reduction to every standard family across dense, sparse and streaming backends.

◆ Where it's heading

The package changed what it is. Through 0.0.3 it was a drop-in replacement for glm() competing on speed; from 0.1.0 it targets the models people leave base R for — MASS::glm.nb, pscl::hurdle, pscl::zeroinfl — and reimplements their full estimation loops natively. The 0.1.1 follow-up is consolidation on that new surface: Firth generalised past binomial logit, SQUAREM acceleration on the zero-inflation EM driver, and a run of clamping guards and initialization fixes on the families most prone to overflow.

◆ Prediction

The numerical-stability work in 0.1.1 clusters on Tweedie and the inverse and sqrt link families, which suggests those paths are the newest and least exercised — expect further correctness fixes there before new model types.

S
sccore
ANALYTICS
0.0

Shared plumbing for the Kharchenko single-cell stack, updated once a year

◆ Current state

sccore is the utility layer under the Kharchenko lab's single-cell packages — embedding plots, dot plots, parallel apply helpers and distance metrics that the downstream tools depend on rather than a tool researchers drive directly. The recent releases fix the Jensen-Shannon distance computation between matrix columns and add optional OpenMP support to the RcppArmadillo build. Cadence is roughly one CRAN release a year.

◆ Where it's heading

Work splits cleanly into two streams: keeping the compiled build acceptable to CRAN as its Makevars policy shifts, and small correctness or interoperability fixes to the plotting and distance helpers. The interoperability thread is the one with direction — embeddingPlot() learning to read Seurat objects in 1.0.6 points at meeting users in the dominant single-cell framework rather than requiring the lab's own object types.

◆ Prediction

Expect the next release to be driven by a CRAN toolchain requirement or a downstream package's needs, with any user-facing change likely another interoperability or plotting fix rather than new capability.

Alternatives to fastglm and sccore

Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either fastglm or sccore.

See all fastglm alternatives → · See all sccore alternatives →

Recent activity from fastglm and sccore

Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.

  1. 2mo agofastglmFirth generalised to all families, plus SQUAREM and stability fixes
  2. 3mo agofastglmCRAN release 0.1.0
  3. 4mo agosccoreJensen-Shannon distance fixed, OpenMP support added
  4. 1y agosccoreembeddingPlot() reads Seurat objects directly
  5. 2y agosccoreVersion 1.0.5
  6. 3y agosccoreVersion 1.0.4
  7. 3y agosccoreVersion 1.0.3
  8. 3y agosccoreVersion 1.0.2
  9. 4y agofastglmC++ headers exposed for linking
  10. 7y agofastglmFirst CRAN release of the C++ IRLS solver

Frequently asked questions

What is the difference between fastglm and sccore?

Both compete on the same themes — r-package — within Analytics. fastglm and sccore are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.

Is fastglm better than sccore?

Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. fastglm and sccore are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.

What are the best alternatives to fastglm?

Top fastglm alternatives in Analytics are ranked by recent ship velocity. Browse the "fastglm alternatives" section above for the current picks, or visit /alternatives/fastglm for the full list with editorial commentary on each.

What are the best alternatives to sccore?

Top sccore alternatives in Analytics are ranked by recent ship velocity. Browse the "sccore alternatives" section above for the current picks, or visit /alternatives/sccore for the full list with editorial commentary on each.