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Single-cell batch correction that learned to use cell labels, then spent three releases chasing Seurat.
Comparison · Analytics
fastglm vs rnpn
A side-by-side editorial comparison of fastglm and rnpn — release velocity, themes, recent moves, and the top alternatives to consider.
Shared themes:r-package
fastglm vs rnpn: at a glance
What is fastglm?
A fast GLM solver stops being one function and becomes a count-model family
fastglm ran C++ IRLS for standard generalized linear models for six years with almost no releases. In May 2026 it added three top-level model types — negative binomial with jointly estimated dispersion, hurdle, and zero-inflated — each with the entire fitting driver in C++ rather than an R loop around a C++ kernel. The following release generalised Firth bias reduction to every standard family across dense, sparse and streaming backends.
What is rnpn?
The USA phenology data client rebuilt its entire stack and stopped handing users -9999 as a number.
rnpn is the R client for the USA National Phenology Network, retrieving observation records, phenometrics and gridded model layers. Version 1.3.0 in March 2025 replaced nearly all of its infrastructure at once — sp and raster dropped, terra made optional, XML swapped for xml2, plyr for dplyr, httr and curl for httr2 — and changed what functions return, with tibbles in place of data.tables and empty tibbles in place of NULL on error. The two releases since have completed the missing-value handling and restored performance lost in the transition.
fastglm vs rnpn: editorial side-by-side
fastglm
0.0ANALYTICS
A fast GLM solver stops being one function and becomes a count-model family
◆ Current state
fastglm ran C++ IRLS for standard generalized linear models for six years with almost no releases. In May 2026 it added three top-level model types — negative binomial with jointly estimated dispersion, hurdle, and zero-inflated — each with the entire fitting driver in C++ rather than an R loop around a C++ kernel. The following release generalised Firth bias reduction to every standard family across dense, sparse and streaming backends.
◆ Where it's heading
The package changed what it is. Through 0.0.3 it was a drop-in replacement for glm() competing on speed; from 0.1.0 it targets the models people leave base R for — MASS::glm.nb, pscl::hurdle, pscl::zeroinfl — and reimplements their full estimation loops natively. The 0.1.1 follow-up is consolidation on that new surface: Firth generalised past binomial logit, SQUAREM acceleration on the zero-inflation EM driver, and a run of clamping guards and initialization fixes on the families most prone to overflow.
◆ Prediction
The numerical-stability work in 0.1.1 clusters on Tweedie and the inverse and sqrt link families, which suggests those paths are the newest and least exercised — expect further correctness fixes there before new model types.
rnpn
0.0ANALYTICS
The USA phenology data client rebuilt its entire stack and stopped handing users -9999 as a number.
◆ Current state
rnpn is the R client for the USA National Phenology Network, retrieving observation records, phenometrics and gridded model layers. Version 1.3.0 in March 2025 replaced nearly all of its infrastructure at once — sp and raster dropped, terra made optional, XML swapped for xml2, plyr for dplyr, httr and curl for httr2 — and changed what functions return, with tibbles in place of data.tables and empty tibbles in place of NULL on error. The two releases since have completed the missing-value handling and restored performance lost in the transition.
◆ Where it's heading
The package is being brought onto the current R stack and made honest about missing data, and those are the same project. Converting the -9999 sentinel to NA started in 1.3.0 for download functions and was extended to all columns in 1.4.1; the string "emptyvalue" got the same treatment. Beyond the migration, the feature additions are modest and specific to the domain, such as custom start and end dates for defining a phenometrics season.
◆ Prediction
With the dependency migration finished and sentinel handling now applied across all columns, the next releases most likely return to domain features and to fixes surfaced by the server side, which has already prompted work through migrations and backend moves. The removed progress indicator is an acknowledged regression that may come back.
Alternatives to fastglm and rnpn
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either fastglm or rnpn.
ggtrace
A debugger for ggplot2's internals, hardening its grip as the internals it traces keep moving.
kde1d
A univariate density estimator that added zero-inflated data and reopened its C++ API to do it.
svines
Stationary vine copulas for time series, released in lockstep with the rest of Nagler's vine stack.
gghighlight
A single-purpose ggplot2 extension that has spent six years tracking ggplot2 instead of growing.
rtrek
A Star Trek data package that became a Memory Alpha web client and has been patching scrapers ever since.
See all fastglm alternatives → · See all rnpn alternatives →
Recent activity from fastglm and rnpn
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 2mo agofastglmFirth generalised to all families, plus SQUAREM and stability fixes
- 3mo agofastglmCRAN release 0.1.0 ⚡
- 11mo agornpnSentinel -9999 now converted to NA across all columns
- 1y agornpnCustom season windows for phenometrics, and a speed regression fixed
- 1y agornpnDependency stack and return types replaced wholesale ⚡
- 1y agornpnBackfilled notes for seven earlier maintenance releases
- 4y agofastglmC++ headers exposed for linking
- 7y agofastglmFirst CRAN release of the C++ IRLS solver
Frequently asked questions
What is the difference between fastglm and rnpn?
Both compete on the same themes — r-package — within Analytics. fastglm and rnpn are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is fastglm better than rnpn?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. fastglm and rnpn are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to fastglm?
Top fastglm alternatives in Analytics are ranked by recent ship velocity. Browse the "fastglm alternatives" section above for the current picks, or visit /alternatives/fastglm for the full list with editorial commentary on each.
What are the best alternatives to rnpn?
Top rnpn alternatives in Analytics are ranked by recent ship velocity. Browse the "rnpn alternatives" section above for the current picks, or visit /alternatives/rnpn for the full list with editorial commentary on each.