osmapiR
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Comparison · Analytics
epidemics vs poissonreg
A side-by-side editorial comparison of epidemics and poissonreg — release velocity, themes, recent moves, and the top alternatives to consider.
epidemics vs poissonreg: at a glance
What is epidemics?
epidemics swapped its C++ engine for odin — and quietly inverted how contact matrices must be passed.
epidemics ships composable compartmental model structures — default SEIR-V, Vacamole, diphtheria and Ebola — with classes for populations, interventions and vaccination campaigns. After more than two years without a release, 0.5.0 landed in July 2026 carrying both an engine migration and a breaking input-convention change. Maintainership moved to a new lead back in 0.4.0.
What is poissonreg?
poissonreg gave its models away to parsnip and kept the glue — now it just keeps glmnet honest.
poissonreg is a tidymodels extension that wires Poisson and zero-inflated count regression into the parsnip interface. Its defining event was giving up ownership: the model definition functions moved into parsnip itself, leaving this package as engine bindings and prediction plumbing. The current dev release is entirely correctness and hygiene work — glmnet predictions now default to mean counts rather than the linear predictor, and single-observation prediction works at last.
epidemics vs poissonreg: editorial side-by-side
epidemics
3.8ANALYTICS
epidemics swapped its C++ engine for odin — and quietly inverted how contact matrices must be passed.
◆ Current state
epidemics ships composable compartmental model structures — default SEIR-V, Vacamole, diphtheria and Ebola — with classes for populations, interventions and vaccination campaigns. After more than two years without a release, 0.5.0 landed in July 2026 carrying both an engine migration and a breaking input-convention change. Maintainership moved to a new lead back in 0.4.0.
◆ Where it's heading
The package's history is a sequence of deliberate breaking releases: 0.2.0 renamed every model function and vectorised the ODE models, 0.3.0 restructured the Ebola model into two levels and made replicates the default, and 0.5.0 rewrites the compiled core. The direction is toward a smaller, more declarative model definition layer with the numerical work delegated to a dedicated tool.
◆ Prediction
With the default, Vacamole and diphtheria systems now declared in odin, the Ebola model is the obvious remaining candidate for the same treatment.
poissonreg
0.0ANALYTICS
poissonreg gave its models away to parsnip and kept the glue — now it just keeps glmnet honest.
◆ Current state
poissonreg is a tidymodels extension that wires Poisson and zero-inflated count regression into the parsnip interface. Its defining event was giving up ownership: the model definition functions moved into parsnip itself, leaving this package as engine bindings and prediction plumbing. The current dev release is entirely correctness and hygiene work — glmnet predictions now default to mean counts rather than the linear predictor, and single-observation prediction works at last.
◆ Where it's heading
Release cadence has collapsed from yearly to a four-year gap between 1.0.1 and the current development version, and the content has shifted from features to deduplication against parsnip — copied helper functions replaced by the upstream originals, obsolete generic registrations removed, tests migrated to the shared extension-package pattern. This is what a stabilized tidymodels satellite looks like: the interface lives upstream, and the package's job is to not drift from it.
◆ Prediction
The dev version's accumulated fixes point to a CRAN release of 1.0.2 as the next move, with content limited to the glmnet prediction corrections rather than any new engine or model type.
Alternatives to epidemics and poissonreg
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either epidemics or poissonreg.
ymlthis
ymlthis retired itself, naming Quarto as the reason it no longer needs to exist.
forestly
forestly built an interactive safety review tool, then taught it to produce submission-ready RTF.
pharmaverseadam
pharmaverseadam is the pharmaverse's test-data mirror, and it now covers neurology.
pkglite
pkglite's whole job is knowing which files in an R package are text — and it keeps getting better at guessing.
gMCPLite
gMCPLite exists to be gMCP without Java, and its releases guard that boundary rather than extend it.
See all epidemics alternatives → · See all poissonreg alternatives →
Recent activity from epidemics and poissonreg
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 25d agoepidemicsODE models migrate to odin; contact matrices must no longer be transposed ⚡
- 3mo agopoissonregglmnet predictions now default to mean counts
- 2y agoepidemicsPeak timing and scenario comparison helpers; negative-susceptible bug fixed
- 2y agoepidemicsEbola model accepts vector inputs and defaults to 100 replicates
- 2y agoepidemicsODE models vectorised; every model function renamed
- 2y agoepidemicsFirst release: four composable compartmental model structures
- 3y agopoissonregDocumentation regenerated for valid HTML5
- 4y agopoissonregCase weight support tracks parsnip 1.0.0
- 4y agopoissonregModel definitions move out of poissonreg into parsnip ⚡
- 4y agopoissonregglm becomes the default engine; tidy() for hurdle models
- 5y agopoissonregFirst release, with a glmnet column-order safeguard
Frequently asked questions
What is the difference between epidemics and poissonreg?
They serve adjacent needs but don't currently overlap on shipped themes. epidemics is currently shipping more aggressively (velocity 3.8 vs 0.0), with 1 editorial sparks in the last 30 days against 0. See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is epidemics better than poissonreg?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. epidemics is currently shipping more aggressively (velocity 3.8 vs 0.0), with 1 editorial sparks in the last 30 days against 0. For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to epidemics?
Top epidemics alternatives in Analytics are ranked by recent ship velocity. Browse the "epidemics alternatives" section above for the current picks, or visit /alternatives/epidemics for the full list with editorial commentary on each.
What are the best alternatives to poissonreg?
Top poissonreg alternatives in Analytics are ranked by recent ship velocity. Browse the "poissonreg alternatives" section above for the current picks, or visit /alternatives/poissonreg for the full list with editorial commentary on each.