randomwalk
randomwalk spent every release getting an R simulation to run in the browser, not on a server.
Comparison · Analytics
ecodive vs probmed
A side-by-side editorial comparison of ecodive and probmed — release velocity, themes, recent moves, and the top alternatives to consider.
ecodive vs probmed: at a glance
What is ecodive?
ecodive rebuilt itself into a broad diversity-metric library, breaking as it went
ecodive computes alpha and beta diversity metrics for ecological and microbiome count data, including phylogenetic measures like Faith's PD and the UniFrac family. The 2.0.0 rewrite expanded it from a handful of metrics to roughly fourteen alpha and thirty beta measures while flipping the expected input orientation to samples-as-rows. Subsequent releases have been spent settling the normalisation interface that expansion exposed.
What is probmed?
probmed went from one probabilistic effect size to a family of them in sixteen days.
probmed computes P_med, a scale-free probabilistic effect size for causal mediation, as part of the Data-Wise mediationverse alongside medfit, medsim and RMediation. Three releases in three weeks took it from a single estimator to four additional families built on a shared cross-fitted corner-EIF core, covering gauge-calibrated, incremental-elasticity and Sobol variance-share versions of the proportion mediated. Distribution is GitHub and r-universe rather than CRAN, with a load-bearing Remotes pin on medfit.
ecodive vs probmed: editorial side-by-side
ecodive
0.0ANALYTICS
ecodive rebuilt itself into a broad diversity-metric library, breaking as it went
◆ Current state
ecodive computes alpha and beta diversity metrics for ecological and microbiome count data, including phylogenetic measures like Faith's PD and the UniFrac family. The 2.0.0 rewrite expanded it from a handful of metrics to roughly fourteen alpha and thirty beta measures while flipping the expected input orientation to samples-as-rows. Subsequent releases have been spent settling the normalisation interface that expansion exposed.
◆ Where it's heading
This is a package that made its breaking changes deliberately and in a cluster. After 2.0.0 reoriented input and removed the weighted parameter, 2.1.0 superseded rescale with norm, and 2.2.6 changed norm's default from percent to none and removed it from some beta functions entirely. That last one matters more than it reads: normalisation defaults silently change the numbers a metric returns, and the direction is toward making the user state their choice rather than inheriting one.
◆ Prediction
With the metric surface broad and the normalisation interface now explicit, expect the next releases to stabilise — documentation and edge-case handling around CLR and rarefaction rather than another interface break.
probmed
0.0ANALYTICS
probmed went from one probabilistic effect size to a family of them in sixteen days.
◆ Current state
probmed computes P_med, a scale-free probabilistic effect size for causal mediation, as part of the Data-Wise mediationverse alongside medfit, medsim and RMediation. Three releases in three weeks took it from a single estimator to four additional families built on a shared cross-fitted corner-EIF core, covering gauge-calibrated, incremental-elasticity and Sobol variance-share versions of the proportion mediated. Distribution is GitHub and r-universe rather than CRAN, with a load-bearing Remotes pin on medfit.
◆ Where it's heading
The pace is manuscript-driven — estimators arrive with their citations attached and vignettes alongside, and the 0.1.0 notes correct the estimand itself against a manuscript definition rather than fixing a bug in code. Each release adds inference machinery as well as point estimates: percentile-bootstrap intervals and Fieller sets in 0.3.0, a deterministic MBCO interval in 0.2.0 that avoids resampling entirely. The gauge residual and the pmed_sensitivity() helper suggest a growing concern with when the estimand does not decompose at all.
◆ Prediction
0.3.0 shipped a sensitivity helper for shared mediator-outcome confounding and a diagnostic that flags non-decomposability, so the next release most likely extends that diagnostic side rather than adding a fifth estimator family.
Alternatives to ecodive and probmed
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either ecodive or probmed.
fastml
fastml added survival modelling and leakage-proof resampling, moving past classification and regression.
abclass
abclass built out angle-based classifiers in 2022, then went quiet except for CRAN upkeep.
churon
churon is spending its entire release history getting a Rust ONNX binding through CRAN.
firatheme
firatheme woke up after four years and started fixing what ggplot2 changed underneath it.
bagyo
bagyo reached CRAN as a Philippine tropical cyclone dataset, with its tags stamped out of order.
See all ecodive alternatives → · See all probmed alternatives →
Recent activity from ecodive and probmed
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 1mo agoprobmedFour estimator families on a cross-fitted corner-EIF core ⚡
- 2mo agoprobmedParallel mediators and a resampling-free MBCO interval ⚡
- 2mo agoprobmedFirst release: pmed() with the estimand corrected
- 4mo agoecodiveNormalisation now defaults to none, with CLR zero warnings
- 7mo agoecodiveecodive 2.2.2
- 10mo agoecodiverescale superseded by norm; crash fixes after the 2.0.0 rewrite
- 10mo agoecodive2.0.0 expands to ~14 alpha and ~30 beta diversity metrics ⚡
Frequently asked questions
What is the difference between ecodive and probmed?
They serve adjacent needs but don't currently overlap on shipped themes. ecodive and probmed are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is ecodive better than probmed?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. ecodive and probmed are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to ecodive?
Top ecodive alternatives in Analytics are ranked by recent ship velocity. Browse the "ecodive alternatives" section above for the current picks, or visit /alternatives/ecodive for the full list with editorial commentary on each.
What are the best alternatives to probmed?
Top probmed alternatives in Analytics are ranked by recent ship velocity. Browse the "probmed alternatives" section above for the current picks, or visit /alternatives/probmed for the full list with editorial commentary on each.