STACAS
Single-cell batch correction that learned to use cell labels, then spent three releases chasing Seurat.
Comparison · Analytics
e2tree vs sdsfun
A side-by-side editorial comparison of e2tree and sdsfun — release velocity, themes, recent moves, and the top alternatives to consider.
Shared themes:r-package
e2tree vs sdsfun: at a glance
What is e2tree?
The explainable-ensemble-tree package now measures whether its own explanations are faithful.
e2tree builds a single interpretable tree that approximates a fitted ensemble, working from the proximity structure the ensemble induces between observations. The 1.0.0 release added the piece that had been missing: a Goodness of Interpretability index quantifying how well the approximating tree reconstructs the ensemble's own proximity matrix, with a permutation test for significance. Interactive visualisation and a C++ backend with OpenMP parallelism arrived alongside, and support now spans ranger and CatBoost as well as the original targets.
What is sdsfun?
A spatial-statistics utility package exists to be depended on, and is built accordingly.
sdsfun collects spatial data science utilities — neighbour lists, spatial constrained clustering, discretization, dummy variable generation, geographical detector statistics and projection helpers — with the computationally heavy parts implemented in Rcpp. It was assembled quickly across late 2024, adding a function set roughly every three weeks, and has slowed since to a couple of releases a year. The most recent work is corrective: no longer initializing the RNG state at load, fixing matrix inputs misread as vectors, and clearing an Armadillo deprecation.
e2tree vs sdsfun: editorial side-by-side
e2tree
0.0ANALYTICS
The explainable-ensemble-tree package now measures whether its own explanations are faithful.
◆ Current state
e2tree builds a single interpretable tree that approximates a fitted ensemble, working from the proximity structure the ensemble induces between observations. The 1.0.0 release added the piece that had been missing: a Goodness of Interpretability index quantifying how well the approximating tree reconstructs the ensemble's own proximity matrix, with a permutation test for significance. Interactive visualisation and a C++ backend with OpenMP parallelism arrived alongside, and support now spans ranger and CatBoost as well as the original targets.
◆ Where it's heading
Development has moved from producing an explanation to defending it. The GoI index and its permutation test change the package's claim from here is a tree that resembles your ensemble to here is how closely it resembles it and whether that could have happened by chance — the question a reviewer asks of any surrogate model. Around that, the work is engineering: the proximity matrix construction moved from R-level parallel loops into C++ with thread-level parallelism, and recent releases have been absorbing the awkwardness of supporting multiple ensemble backends, where a multi-class CatBoost objective returns a score matrix where a vector was expected. Interactive visNetwork output and standalone HTML export point at explanations meant to be shared rather than only inspected.
◆ Prediction
Given how much recent effort has gone into per-backend adapters, expect further work on ensemble compatibility; the entries do not indicate whether the interpretability index is heading toward comparing surrogate trees against each other.
sdsfun
0.0ANALYTICS
A spatial-statistics utility package exists to be depended on, and is built accordingly.
◆ Current state
sdsfun collects spatial data science utilities — neighbour lists, spatial constrained clustering, discretization, dummy variable generation, geographical detector statistics and projection helpers — with the computationally heavy parts implemented in Rcpp. It was assembled quickly across late 2024, adding a function set roughly every three weeks, and has slowed since to a couple of releases a year. The most recent work is corrective: no longer initializing the RNG state at load, fixing matrix inputs misread as vectors, and clearing an Armadillo deprecation.
◆ Where it's heading
This is infrastructure for a family of packages rather than an end-user tool, and the changelog says so directly — functions were added to support gdverse and sesp, and moran_test was migrated in from geocomplexity. That migration pattern is the defining move: capability consolidates here so the downstream packages can share it instead of each carrying its own copy. Growth has slowed as that consolidation completed, leaving correctness and dependency upkeep.
◆ Prediction
Given the package moves when its dependents need something, the next release most likely brings in another shared function or responds to a downstream requirement rather than following its own plan. Armadillo and CRAN check changes remain the reliable source of maintenance work.
Alternatives to e2tree and sdsfun
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either e2tree or sdsfun.
ggtrace
A debugger for ggplot2's internals, hardening its grip as the internals it traces keep moving.
kde1d
A univariate density estimator that added zero-inflated data and reopened its C++ API to do it.
svines
Stationary vine copulas for time series, released in lockstep with the rest of Nagler's vine stack.
gghighlight
A single-purpose ggplot2 extension that has spent six years tracking ggplot2 instead of growing.
rtrek
A Star Trek data package that became a Memory Alpha web client and has been patching scrapers ever since.
See all e2tree alternatives → · See all sdsfun alternatives →
Recent activity from e2tree and sdsfun
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 3mo agoe2treeCatBoost multi-class and loss-function handling repaired
- 4mo agoe2treeA significance-tested measure of explanation fidelity ⚡
- 10mo agosdsfunPackage load stops touching the RNG state
- 1y agoe2treeranger models supported
- 1y agosdsfunUnified partial correlation testing and head/tails discretization
- 1y agosdsfunMissing-value handling added to linear trend removal
- 1y agosdsfunCovariate-based detrending and long-to-matrix spatial reshaping
- 1y agosdsfunSpatially constrained hierarchical clustering and SPADE estimation
- 1y agosdsfunFast geodetector q-value estimator added
Frequently asked questions
What is the difference between e2tree and sdsfun?
Both compete on the same themes — r-package — within Analytics. e2tree and sdsfun are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is e2tree better than sdsfun?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. e2tree and sdsfun are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to e2tree?
Top e2tree alternatives in Analytics are ranked by recent ship velocity. Browse the "e2tree alternatives" section above for the current picks, or visit /alternatives/e2tree for the full list with editorial commentary on each.
What are the best alternatives to sdsfun?
Top sdsfun alternatives in Analytics are ranked by recent ship velocity. Browse the "sdsfun alternatives" section above for the current picks, or visit /alternatives/sdsfun for the full list with editorial commentary on each.