STACAS
Single-cell batch correction that learned to use cell labels, then spent three releases chasing Seurat.
Comparison · Analytics
dubicube vs incase
A side-by-side editorial comparison of dubicube and incase — release velocity, themes, recent moves, and the top alternatives to consider.
dubicube vs incase: at a glance
What is dubicube?
dubicube grew from a bootstrap helper into the uncertainty layer other B-Cubed packages call.
dubicube supplies bootstrapping and confidence-interval machinery for biodiversity data cubes in the B-Cubed project. The 0.10–0.12 series added the things a library needs to be depended on rather than copied: automatic detection of group-specific versus whole-cube bootstrapping, an optional boot backend, and then a second capability area in 0.12.0 with data quality diagnostics and cube filtering. The sibling indicator package b3gbi now delegates its confidence intervals here.
What is incase?
A safer case_when that keeps hardening its guarantees while realigning to tidyverse naming.
incase supplies in_case(), switch_case(), grep_case() and fn_case() as vectorised recoding functions in the dplyr::case_when idiom, with _fct and _list variants that return factors or lists instead of forcing atomic type conversion. The 0.4.0 release deprecates the undotted preserve, default and ordered arguments in favour of dotted forms, starting a removal clock, and adds .exhaustive to error on unmatched inputs.
dubicube vs incase: editorial side-by-side
dubicube
0.0ANALYTICS
dubicube grew from a bootstrap helper into the uncertainty layer other B-Cubed packages call.
◆ Current state
dubicube supplies bootstrapping and confidence-interval machinery for biodiversity data cubes in the B-Cubed project. The 0.10–0.12 series added the things a library needs to be depended on rather than copied: automatic detection of group-specific versus whole-cube bootstrapping, an optional boot backend, and then a second capability area in 0.12.0 with data quality diagnostics and cube filtering. The sibling indicator package b3gbi now delegates its confidence intervals here.
◆ Where it's heading
Release notes are terse — usually one line and an issue number — but the direction is legible in what gets automated. Decisions the caller used to make explicitly are being inferred: resampling scope in 0.10.0, the no-bias option in 0.11.0, and process_cube_args threaded through filter_cube() so the filtering path matches cube processing. The diagnostics work in 0.12.x is the newer line, and 0.12.2's rename of the heatmap option to rule suggests that surface is still settling.
◆ Prediction
The diagnostics and filtering additions have needed a follow-up fix in each of the two releases since they landed, so the next release is most likely more consolidation there rather than a new capability area.
incase
0.0ANALYTICS
A safer case_when that keeps hardening its guarantees while realigning to tidyverse naming.
◆ Current state
incase supplies in_case(), switch_case(), grep_case() and fn_case() as vectorised recoding functions in the dplyr::case_when idiom, with _fct and _list variants that return factors or lists instead of forcing atomic type conversion. The 0.4.0 release deprecates the undotted preserve, default and ordered arguments in favour of dotted forms, starting a removal clock, and adds .exhaustive to error on unmatched inputs.
◆ Where it's heading
The arc is consistently toward catching recoding mistakes at the call site rather than letting them pass silently. Early releases broadened how a match can be expressed — pattern matching, function application, factor and list returns. Recent work has shifted to guarantees about the result: correct factor level ordering relative to .default, and now an exhaustiveness check. Notably 0.4.0 reverses the 0.3.2 decision to accept arguments with or without dots, trading that flexibility for namespace safety against user-supplied case names.
◆ Prediction
The deprecation warnings introduced in 0.4.0 point to a follow-up release that removes the undotted arguments outright. Whether .exhaustive eventually becomes the default is unclear from these entries.
Alternatives to dubicube and incase
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either dubicube or incase.
ggtrace
A debugger for ggplot2's internals, hardening its grip as the internals it traces keep moving.
kde1d
A univariate density estimator that added zero-inflated data and reopened its C++ API to do it.
svines
Stationary vine copulas for time series, released in lockstep with the rest of Nagler's vine stack.
gghighlight
A single-purpose ggplot2 extension that has spent six years tracking ggplot2 instead of growing.
rtrek
A Star Trek data package that became a Memory Alpha web client and has been patching scrapers ever since.
See all dubicube alternatives → · See all incase alternatives →
Recent activity from dubicube and incase
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 1mo agodubicubePackage build fixes
- 3mo agodubicubeFilter vignette documentation and rule-function fix
- 3mo agodubicubeprocess_cube_args in filter_cube(); heatmap option renamed to rule
- 4mo agodubicubeData quality diagnostics and cube filtering ⚡
- 5mo agodubicubeZenodo grant ID and metadata fixes
- 6mo agodubicubeNo-bias bootstrap option automated
- 11mo agoincaseDotted arguments and an .exhaustive matching check
- 2y agoincaseDotted and undotted arguments both accepted
- 5y agoincaseFix NULL return when no condition matches
- 5y agoincaseFactor and list return families arrive
- 5y agoincaseDrop unused stats import to clear a check NOTE
- 5y agoincasePattern and function-based matching families added
Frequently asked questions
What is the difference between dubicube and incase?
They serve adjacent needs but don't currently overlap on shipped themes. dubicube and incase are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is dubicube better than incase?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. dubicube and incase are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to dubicube?
Top dubicube alternatives in Analytics are ranked by recent ship velocity. Browse the "dubicube alternatives" section above for the current picks, or visit /alternatives/dubicube for the full list with editorial commentary on each.
What are the best alternatives to incase?
Top incase alternatives in Analytics are ranked by recent ship velocity. Browse the "incase alternatives" section above for the current picks, or visit /alternatives/incase for the full list with editorial commentary on each.