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Comparison · Infra & APIs

driveR vs metR

A side-by-side editorial comparison of driveR and metR — release velocity, themes, recent moves, and the top alternatives to consider.

Shared themes:r-package

driveR vs metR: at a glance

FeaturedriveRmetR
SectorInfra & APIsInfra & APIs
Velocity score0.00.0
Sparks · 30d00
Top themescancer-genomics, bioinformatics, r-package, driver-genesmeteorology, ggplot2, r-package, netcdf
Last editorial update1h ago1h ago
WebsiteVisit →Visit →

What is driveR?

A cancer driver prioritization package that ships rarely and mostly to stay installable

driveR prioritizes cancer driver genes from somatic variant and copy number data, combining coding impact scores, noncoding impact, copy number alteration scores and hotspot annotations into a multi-task learning classification model. Version 0.5.0 added gene-level SCNA data frames as an accepted input to create_features_df(), with an example table shipped alongside, widening the entry point beyond the segment-level format. The same release moved org.Hs.eg.db and both hg19 and hg38 TxDb annotation packages from Imports to Suggests under new CRAN policy, with dependent functions now raising an error when they are absent rather than silently degrading.

Read the full driveR trajectory →

What is metR?

A meteorology ggplot2 extension where the netCDF reader became the main event

metR supplies meteorological and oceanographic tools for R: contour and streamline geoms, EOF decomposition, wave fitting, and ReadNetCDF() for getting gridded data in. Development has concentrated heavily on that reader. Version 0.18.0 added subsetting by dimension index, so the first or last ten timesteps can be read without knowing how many exist; 0.18.1 moved time parsing to the CFtime package; 0.18.2 added cdo operations through rcdo and reading across multiple files in parallel, and fixed a subsetting bug where nearest-gridpoint matching could return data outside the requested range entirely.

Read the full metR trajectory →

driveR vs metR: editorial side-by-side

D
driveR
INFRA · APIS
0.0

A cancer driver prioritization package that ships rarely and mostly to stay installable

◆ Current state

driveR prioritizes cancer driver genes from somatic variant and copy number data, combining coding impact scores, noncoding impact, copy number alteration scores and hotspot annotations into a multi-task learning classification model. Version 0.5.0 added gene-level SCNA data frames as an accepted input to create_features_df(), with an example table shipped alongside, widening the entry point beyond the segment-level format. The same release moved org.Hs.eg.db and both hg19 and hg38 TxDb annotation packages from Imports to Suggests under new CRAN policy, with dependent functions now raising an error when they are absent rather than silently degrading.

◆ Where it's heading

Releases are infrequent and split cleanly between capability and correction. GRCh38 support arrived in 0.4.0 and cancer-type-specific thresholds were refreshed in 0.3.0, while the 0.2.x pair fixed scoring errors serious enough to require retraining: a column name mismatch meant the SCNA score was not being computed at all, and MCR table coordinates needed converting from hg18 to hg19. Both times the bundled classification model and thresholds were rebuilt as a consequence. Since 0.4.0 the changes have been input handling and packaging rather than method.

◆ Prediction

The move of the annotation databases to Suggests suggests a leaner install is the current priority; the entries give no indication of planned model or scoring changes.

M
metR
INFRA · APIS
0.0

A meteorology ggplot2 extension where the netCDF reader became the main event

◆ Current state

metR supplies meteorological and oceanographic tools for R: contour and streamline geoms, EOF decomposition, wave fitting, and ReadNetCDF() for getting gridded data in. Development has concentrated heavily on that reader. Version 0.18.0 added subsetting by dimension index, so the first or last ten timesteps can be read without knowing how many exist; 0.18.1 moved time parsing to the CFtime package; 0.18.2 added cdo operations through rcdo and reading across multiple files in parallel, and fixed a subsetting bug where nearest-gridpoint matching could return data outside the requested range entirely.

◆ Where it's heading

Two threads run through the releases. The first is tracking ggplot2, absorbing the linewidth aesthetic, the trans to transform rename and guide compatibility as each landed upstream. The second is narrowing scope while deepening the data path: GetSMNData() was made defunct as too specific for a general package, raster and gdal dependencies were removed, and the udunits2 dependency was dropped when it was orphaned, initially replaced by a homebrewed date parser and eventually by CFtime. The result is a package steadily shedding its own code in favour of specialised upstream libraries.

◆ Prediction

Expect further ReadNetCDF() work, since it has received features in four of the last five releases and the rcdo integration opens a large surface of operations to expose.

Alternatives to driveR and metR

Other Infra & APIs products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either driveR or metR.

See all driveR alternatives → · See all metR alternatives →

Recent activity from driveR and metR

Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.

  1. 7mo agometRSubset notation fix in the netCDF reader
  2. 7mo agodriveRGene-level copy number input accepted, annotation packages made optional
  3. 11mo agometRcdo operations, parallel multi-file reads, and a subsetting correctness fix
  4. 1y agometRnetCDF time parsing handed to the CFtime package
  5. 1y agometRnetCDF subsetting by dimension index
  6. 1y agometRLongitude scales pass the transform argument correctly
  7. 1y agometREOF rotation takes a function, and scope narrows
  8. 3y agodriveRCRAN documentation error fixed
  9. 4y agodriveRGRCh38 genome build supported
  10. 4y agodriveRCancer-type-specific thresholds updated
  11. 5y agodriveRMCR coordinates converted to hg19 and the model retrained
  12. 5y agodriveRCopy number score was never being computed, model rebuilt

Frequently asked questions

What is the difference between driveR and metR?

Both compete on the same themes — r-package — within Infra & APIs. driveR and metR are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.

Is driveR better than metR?

Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. driveR and metR are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Infra & APIs products to evaluate alongside.

What are the best alternatives to driveR?

Top driveR alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "driveR alternatives" section above for the current picks, or visit /alternatives/driver for the full list with editorial commentary on each.

What are the best alternatives to metR?

Top metR alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "metR alternatives" section above for the current picks, or visit /alternatives/metr for the full list with editorial commentary on each.