paleobuddy
paleobuddy can now simulate trait-dependent diversification, not just birth-death.
Comparison · Analytics
dggridR vs treespace
A side-by-side editorial comparison of dggridR and treespace — release velocity, themes, recent moves, and the top alternatives to consider.
dggridR vs treespace: at a glance
What is dggridR?
A discrete global grid generator grew cell traversal and became a usable spatial index.
dggridR builds discrete global grids — icosahedral tessellations of the Earth into equal-area hexagonal or triangular cells — by wrapping the DGGRID C++ engine. The 4.1.0 release adds dgneighbors, dgchildren and dgparent for moving between adjacent cells and across resolutions, plus dgpoints_to_cells and dgbin_points for mapping and aggregating point data into cells. New aperture 7 and mixed-aperture ISEA43H grid types arrive alongside them.
What is treespace?
treespace ships once every year or two, and only when CRAN or a user forces it.
treespace explores and compares sets of phylogenetic and transmission trees, including the tree-distance measures used in outbreak reconstruction. Its release history is entirely reactive: five updates across five years, each triggered by a CRAN policy change, an upstream package removal, or a bug someone reported. The most recent is an Rd cross-reference format patch plus a maintainer email change.
dggridR vs treespace: editorial side-by-side
dggridR
0.0ANALYTICS
A discrete global grid generator grew cell traversal and became a usable spatial index.
◆ Current state
dggridR builds discrete global grids — icosahedral tessellations of the Earth into equal-area hexagonal or triangular cells — by wrapping the DGGRID C++ engine. The 4.1.0 release adds dgneighbors, dgchildren and dgparent for moving between adjacent cells and across resolutions, plus dgpoints_to_cells and dgbin_points for mapping and aggregating point data into cells. New aperture 7 and mixed-aperture ISEA43H grid types arrive alongside them.
◆ Where it's heading
The package changed hands in effect as well as in code: the 4.0.0 engine update to DGGRID v9.0b and the first real test suite were contributed by Sebastian Krantz, who also maintains the upstream engine fork, and 4.1.0's feature burst followed two weeks later. The direction of that burst is unmistakable — away from generating grids for plotting and toward using them as an indexing structure that point data gets binned into and navigated through.
◆ Prediction
Expect the cell hierarchy functions to extend to non-hexagonal apertures and multi-level traversal, closing the remaining gaps against established global indexing systems.
treespace
0.0ANALYTICS
treespace ships once every year or two, and only when CRAN or a user forces it.
◆ Current state
treespace explores and compares sets of phylogenetic and transmission trees, including the tree-distance measures used in outbreak reconstruction. Its release history is entirely reactive: five updates across five years, each triggered by a CRAN policy change, an upstream package removal, or a bug someone reported. The most recent is an Rd cross-reference format patch plus a maintainer email change.
◆ Where it's heading
The package is stable and lightly staffed rather than abandoned — bugs that affect correctness do get fixed, and CRAN deadlines are met. But the 2023 update is the telling one: rather than vendor or replace adephylo when it faced removal, the maintainers disabled two tree-vector methods and marked the loss as hopefully temporary. Two years on, nothing in the feed indicates they came back.
◆ Prediction
The next entry will most likely be another CRAN-compliance patch, on the pattern of four of the last five releases. Whether the Abouheif and sumDD methods ever return is not something these entries give any signal on.
Alternatives to dggridR and treespace
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either dggridR or treespace.
geodist
geodist stays dependency-free and fast, and warns you when 'cheap' distances stop being honest.
errors
errors keeps making uncertainty print the way each scientific field expects.
CMAQ
CMAQ went global in v5.5, and has been patching that surface ever since.
enpls
enpls has not changed its statistics since 2016 — only its website, twice.
grex
grex is a lookup table with a version number — it ships when the annotation moves.
See all dggridR alternatives → · See all treespace alternatives →
Recent activity from dggridR and treespace
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 3mo agodggridRCell neighbors, parents and children make the grid navigable ⚡
- 3mo agodggridRBundled DGGRID engine updated to v9.0b with a test suite
- 3mo agodggridRMaster merged into development ahead of the 4.0 work
- 11mo agotreespacetreespace patches Rd cross-references for CRAN
- 2y agotreespacetreespace disables Abouheif and sumDD as adephylo exits CRAN
- 3y agotreespacetreespace fixes vignette build on NA tree names
- 5y agotreespacetreespace fixes dist indexing that broke its tests
- 5y agotreespacetreespace corrects tip label handling in transmission distances
Frequently asked questions
What is the difference between dggridR and treespace?
They serve adjacent needs but don't currently overlap on shipped themes. dggridR and treespace are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is dggridR better than treespace?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. dggridR and treespace are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to dggridR?
Top dggridR alternatives in Analytics are ranked by recent ship velocity. Browse the "dggridR alternatives" section above for the current picks, or visit /alternatives/dggridr for the full list with editorial commentary on each.
What are the best alternatives to treespace?
Top treespace alternatives in Analytics are ranked by recent ship velocity. Browse the "treespace alternatives" section above for the current picks, or visit /alternatives/treespace-r for the full list with editorial commentary on each.