tidytlg
A tables-listings-graphs package that reached CRAN and then went quiet.
Comparison · Analytics
datasetjson vs serofoi
A side-by-side editorial comparison of datasetjson and serofoi — release velocity, themes, recent moves, and the top alternatives to consider.
datasetjson vs serofoi: at a glance
What is datasetjson?
datasetjson rebuilt its object model to track the CDISC Dataset-JSON 1.1 schema.
datasetjson reads and writes CDISC Dataset-JSON, the JSON replacement for SAS transport files in clinical-trial submissions. The package went from a thin reader in 2023 to a redesigned interface in 0.3.0 that targets the 1.1.0 schema, uses yyjsonr as its JSON backend, and exposes column metadata as first-class arguments. Development is contributor-driven inside the Atorus and pharmaverse orbit.
What is serofoi?
serofoi grew a serosurvey simulator alongside the force-of-infection models it was built to fit.
serofoi estimates the force of infection from serological survey data using Bayesian serocatalytic models fitted through Stan. Beyond fitting it now simulates serosurveys — specifying a model and a survey design and generating the data such a survey would produce. The most recent release is visualisation and naming work.
datasetjson vs serofoi: editorial side-by-side
datasetjson
0.0ANALYTICS
datasetjson rebuilt its object model to track the CDISC Dataset-JSON 1.1 schema.
◆ Current state
datasetjson reads and writes CDISC Dataset-JSON, the JSON replacement for SAS transport files in clinical-trial submissions. The package went from a thin reader in 2023 to a redesigned interface in 0.3.0 that targets the 1.1.0 schema, uses yyjsonr as its JSON backend, and exposes column metadata as first-class arguments. Development is contributor-driven inside the Atorus and pharmaverse orbit.
◆ Where it's heading
The package's roadmap is not its own — it tracks a CDISC standard that is still moving, and 0.3.0 is what happens when the standard revises: object model, read and write paths, and JSON backend all changed together. Performance was addressed in the same pass, which matters because submission datasets are large enough that a slow serialiser is a real constraint.
◆ Prediction
The next significant release will most likely follow the next Dataset-JSON schema revision rather than an internal roadmap, given that 0.3.0 was driven entirely by the 1.1.0 update.
serofoi
0.0ANALYTICS
serofoi grew a serosurvey simulator alongside the force-of-infection models it was built to fit.
◆ Current state
serofoi estimates the force of infection from serological survey data using Bayesian serocatalytic models fitted through Stan. Beyond fitting it now simulates serosurveys — specifying a model and a survey design and generating the data such a survey would produce. The most recent release is visualisation and naming work.
◆ Where it's heading
The package moved from fitting-only to a fit-and-simulate pair. 0.1.0 added simulation from time- or age-varying force-of-infection trends and simplified the fitted object down to a Stan fit; 1.0.2 broadened simulation into full serosurvey generation with its own vignette. 1.0.3 then spent its effort on naming consistency and plotting options, which is what a package does once its scope is set.
◆ Prediction
With simulation and fitting both in place, the natural next step is tooling that closes the loop between them — recovery checks or study-design guidance built on simulated surveys.
Alternatives to datasetjson and serofoi
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either datasetjson or serofoi.
Tplyr
Tplyr made clinical summary tables explain where every number came from.
rlistings
Clinical listings that keep inheriting their hardest problem — pagination — from the layer below.
hoardr
A cache-directory helper that has shipped nothing but CRAN-triggered patches for seven years.
gigs
gigs redesigned its whole conversion API for rOpenSci, then spent three releases getting the docs to build.
riem
A weather-data client that keeps rewriting its HTTP layer while slowly tightening its API.
See all datasetjson alternatives → · See all serofoi alternatives →
Recent activity from datasetjson and serofoi
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 1y agoserofoiConstant FoI plots, r-hat plotting and shorter parameter names
- 1y agodatasetjsonDataset-JSON 1.1.0 support with a redesigned object model ⚡
- 1y agoserofoiSerological surveys can now be simulated end to end
- 2y agoserofoiSimulation functions added; fitted output simplified to a Stan fit
- 2y agodatasetjsonReads and validates Dataset-JSON from URLs
- 2y agodatasetjsonInitial CRAN release
- 3y agoserofoiFirst release: three force-of-infection models and the core modules
Frequently asked questions
What is the difference between datasetjson and serofoi?
They serve adjacent needs but don't currently overlap on shipped themes. datasetjson and serofoi are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is datasetjson better than serofoi?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. datasetjson and serofoi are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to datasetjson?
Top datasetjson alternatives in Analytics are ranked by recent ship velocity. Browse the "datasetjson alternatives" section above for the current picks, or visit /alternatives/datasetjson for the full list with editorial commentary on each.
What are the best alternatives to serofoi?
Top serofoi alternatives in Analytics are ranked by recent ship velocity. Browse the "serofoi alternatives" section above for the current picks, or visit /alternatives/serofoi for the full list with editorial commentary on each.