collinear vs ibis.iSDM

collinear removes multicollinearity from predictor sets through pairwise correlation and VIF filtering, with a preference order deciding which variable survives each conflict. Two major versions in thirteen months each rewrote the interface: 2.0.0 extended every function to any combination of categorical and numeric responses and predictors, and 3.0.0 moved to multiple responses, restructured the output into classed objects, and made both filtering thresholds adaptive by default. Version 3.0.1 is the first release since that is purely repair.

The through-line is removing decisions the user was never well placed to make. Preference-order functions were renamed twice — first onto a metric-and-model scheme in 2.0.0, then onto a response-type scheme in 3.0.0 — and f_auto() picks one when none is given; target encoding went from automatic to opt-in; max_cor and max_vif now default to NULL and trigger a data-driven threshold derived from the 75th percentile of pairwise correlations through a sigmoid and a fitted correlation-to-VIF mapping. Each change is defensible and each one broke callers, which is the cost of this approach.

3.0.1 moved the example datasets out into a separate spatialData package and fixed four crashes rather than adding anything, so the next release is most likely more consolidation on the 3.0 surface than a fourth interface.