qqman
The Manhattan-plot package for GWAS results, finished and dormant since 2017.
Comparison · Analytics
CMAQ vs fossilsim
A side-by-side editorial comparison of CMAQ and fossilsim — release velocity, themes, recent moves, and the top alternatives to consider.
CMAQ vs fossilsim: at a glance
What is CMAQ?
CMAQ went global in v5.5, and has been patching that surface ever since.
CMAQ is the EPA's Community Multiscale Air Quality modeling system, used for regulatory and research air quality simulation. Its release rhythm is strictly two-tier: numbered major versions carry new science and fresh benchmark datasets, while the x.y.z.n updates carry bug fixes against documentation and benchmarks that stay pinned to the parent version. The current line is v5.5, which introduced CRACMM2 chemistry and coupling to MPAS-A meteorology, followed by three patch rollups.
What is fossilsim?
A fossil-record simulator that quietly grew a trait-evolution engine.
FossilSim is a mature R package for simulating fossil records on phylogenetic trees, and its release cadence reflects that: long gaps punctuated by a single capability addition. The last four releases span three years, with the most recent being a compatibility sync to its companion Shiny front-end rather than new functionality. The core simulation surface has been stable since 2022.
CMAQ vs fossilsim: editorial side-by-side
CMAQ
0.0ANALYTICS
CMAQ went global in v5.5, and has been patching that surface ever since.
◆ Current state
CMAQ is the EPA's Community Multiscale Air Quality modeling system, used for regulatory and research air quality simulation. Its release rhythm is strictly two-tier: numbered major versions carry new science and fresh benchmark datasets, while the x.y.z.n updates carry bug fixes against documentation and benchmarks that stay pinned to the parent version. The current line is v5.5, which introduced CRACMM2 chemistry and coupling to MPAS-A meteorology, followed by three patch rollups.
◆ Where it's heading
The v5.5 patches cluster around the newest and most sensitive components. ISAM source apportionment and DDM-3D sensitivity analysis account for corrections in every one of the three updates, and CRACMM2 needed fixes within months of release. That is the expected shape after a major version lands: the science is stable, the instrumentation built on top of it is not. Parallel I/O work in the latest patch suggests the global configurations are now being run at scales that expose throughput limits.
◆ Prediction
The next major version will fold these fixes in with new science, documentation and benchmark data — the release notes state this explicitly each time. Until then, expect further ISAM and DDM-3D corrections, which have appeared in every patch so far.
fossilsim
0.0ANALYTICS
A fossil-record simulator that quietly grew a trait-evolution engine.
◆ Current state
FossilSim is a mature R package for simulating fossil records on phylogenetic trees, and its release cadence reflects that: long gaps punctuated by a single capability addition. The last four releases span three years, with the most recent being a compatibility sync to its companion Shiny front-end rather than new functionality. The core simulation surface has been stable since 2022.
◆ Where it's heading
The arc runs from sampling mechanics toward simulating what the organisms actually were. Version 2.2.0 taught the package to handle occurrence data for occurrence birth-death models; 2.3.0 then added trait simulation under Mk, BM and OU, which is a different kind of output than fossil ages. Since then the work has been maintenance and keeping the FossilSimShiny GUI in step, suggesting the authors consider the current model set feature-complete.
◆ Prediction
The pairing of the 2.3.3 release with a FossilSimShiny version bump points to the GUI, not the library, as where the next visible work lands. The entries do not show enough activity to predict a specific new model family.
Alternatives to CMAQ and fossilsim
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either CMAQ or fossilsim.
constants
The R package for CODATA constants rebuilt its symbol table on NIST's naming so future updates stop being hand work.
austraits
The R client for AusTraits spends its releases chasing the dataset it reads.
ggdemetra
A ggplot2 layer for seasonal adjustment output, filling in one plot type at a time.
tern.rbmi
Reference-based multiple imputation tables, shipping only what CRAN checks demand.
tern.mmrm
An MMRM tabulation package that has published nothing since its 2024 CRAN releases.
See all CMAQ alternatives → · See all fossilsim alternatives →
Recent activity from CMAQ and fossilsim
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 1y agoCMAQCMAQ 5.5.0.3 enables parallel I/O, fixes DDM-3D control files
- 1y agoCMAQCMAQ 5.5.0.2 corrects ISAM aerosol and cloud processing
- 1y agoCMAQCMAQ 5.5.0.1 fixes SAPRC mechanism runs and NLCD mapping
- 1y agoCMAQCMAQ 5.5 adds global simulation coupled to MPAS-A ⚡
- 1y agoCMAQCMAQ 5.4.0.5: minor ELMO output fixes
- 2y agofossilsimCompatibility bump for FossilSimShiny 1.1.2
- 2y agoCMAQCMAQ 5.4.0.4 fixes RBSTATS under ROS3, corrects a molecular weight
- 4y agofossilsimBug fixes and documentation cleanup
- 4y agofossilsimTrait simulation arrives: Mk, BM and OU models ⚡
- 5y agofossilsimOccurrence handling for the occurrence birth-death model
Frequently asked questions
What is the difference between CMAQ and fossilsim?
They serve adjacent needs but don't currently overlap on shipped themes. CMAQ and fossilsim are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is CMAQ better than fossilsim?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. CMAQ and fossilsim are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to CMAQ?
Top CMAQ alternatives in Analytics are ranked by recent ship velocity. Browse the "CMAQ alternatives" section above for the current picks, or visit /alternatives/cmaq for the full list with editorial commentary on each.
What are the best alternatives to fossilsim?
Top fossilsim alternatives in Analytics are ranked by recent ship velocity. Browse the "fossilsim alternatives" section above for the current picks, or visit /alternatives/fossilsim-r for the full list with editorial commentary on each.