rollupTree
The recursive-computation engine under massProps grows the accessors its consumer needed
Comparison · Infra & APIs
checkhelper vs valr
A side-by-side editorial comparison of checkhelper and valr — release velocity, themes, recent moves, and the top alternatives to consider.
Shared themes:r-packages
checkhelper vs valr: at a glance
What is checkhelper?
checkhelper grew from a check wrapper into a CRAN pre-submission auditor.
1.0.0 added a whole audit_* family — audit_downloads(), audit_description(), audit_dontrun() and audit_citation() — each parsing package source statically and returning a tibble of hits paired with a suggested fix. The package is now defending that position: 1.0.1 rc1 is a submission candidate answering a CRAN archival notice, after roxygen2 8.x moved DESCRIPTION's RoxygenNote field and broke a find_missing_tags() test fixture.
What is valr?
valr's interval verbs now read genomic files in place instead of demanding a loaded tibble.
valr reimplements bedtools-style genome interval arithmetic as tidyverse verbs backed by C++. Its long project has been closing the behavioural gap with bedtools — the book-ended interval semantics finally match in 0.10.0, three releases after the deprecation began. The July release also ends the assumption that intervals must be in memory: bed_map(), bed_intersect(), bed_subtract(), bed_coverage() and bed_window() accept a bigWig or bigBed path or URL where an interval table used to go.
checkhelper vs valr: editorial side-by-side
checkhelper
2.5INFRA · APIS
checkhelper grew from a check wrapper into a CRAN pre-submission auditor.
◆ Current state
1.0.0 added a whole audit_* family — audit_downloads(), audit_description(), audit_dontrun() and audit_citation() — each parsing package source statically and returning a tibble of hits paired with a suggested fix. The package is now defending that position: 1.0.1 rc1 is a submission candidate answering a CRAN archival notice, after roxygen2 8.x moved DESCRIPTION's RoxygenNote field and broke a find_missing_tags() test fixture.
◆ Where it's heading
The design commitment is static analysis — AST walks via getParseData(), line-by-line Rd reading, no eval() and no namespace loading — so the tool can report on a package it never runs. That commitment is what made the roxygen2 8.x break survivable: the audit pipeline itself was verified correct under 8.1.0 and only the test scaffolding had to go, now guarded by a dedicated regression test. fix_globals(write = TRUE) is being sanded down in parallel, no longer flattening per-function grouping comments or writing a degenerate empty globalVariables() shell.
◆ Prediction
The immediate move is the 1.0.1 submission itself, clearing the archival notice. Beyond that, each additional CRAN incoming-check rule remains a candidate for another audit_* function; the open question these notes still leave is whether the family ever gets a single combined entry point.
valr
0.0INFRA · APIS
valr's interval verbs now read genomic files in place instead of demanding a loaded tibble.
◆ Current state
valr reimplements bedtools-style genome interval arithmetic as tidyverse verbs backed by C++. Its long project has been closing the behavioural gap with bedtools — the book-ended interval semantics finally match in 0.10.0, three releases after the deprecation began. The July release also ends the assumption that intervals must be in memory: bed_map(), bed_intersect(), bed_subtract(), bed_coverage() and bed_window() accept a bigWig or bigBed path or URL where an interval table used to go.
◆ Where it's heading
Two arcs converge here. One is compatibility: min_overlap arrived with a deprecation warning in 0.9.0 and its default flipped from 0 to 1 in 0.10.0, so book-ended intervals are excluded by default as bedtools does, with the internal calculations in bed_closest() and friends deliberately left counting them. The other is the file-backed path, which grew out of the cpp11bigwig dependency adopted in 0.8.3 for read_bigwig() and re-exported in 0.9.0 — reading a file became querying one. Underneath, the C++ base keeps getting lighter: Rcpp swapped for cpp11, rlang cut to a single function, per-group memory copies removed from three verbs.
◆ Prediction
Only five verbs take a file argument today and bed_closest(), bed_glyph() and the statistical verbs do not, so extending the file-backed path across the rest of the API is the obvious follow-up. The deprecated tibble re-exports and the now-defunct n_fields argument suggest continued removal of the compatibility layer in the next minor release.
Alternatives to checkhelper and valr
Other Infra & APIs products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either checkhelper or valr.
massProps
A mass-properties rollup spends a year on documentation and follows its sibling's API
writeAlizer
Six months of releases and not one of them touched the scoring models
samplr
A cognitive-science sampling package ships once, then goes quiet for eighteen months
stochvol
A Bayesian volatility sampler in its maintenance decade, paying for its own speed
midr
A black-box interpreter reaches CRAN, then learns multi-class and survival responses
See all checkhelper alternatives → · See all valr alternatives →
Recent activity from checkhelper and valr
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 1d agocheckhelpercheckhelper 1.0.1 rc1 (CRAN submission candidate)
- 1mo agovalrInterval verbs read bigWig and bigBed files directly ⚡
- 3mo agocheckhelperA static audit_* family for CRAN pre-submission checks ⚡
- 7mo agovalrbed_slop() and bed_flank() preserve input row order
- 8mo agovalrmin_overlap introduced; C++ backend moves from Rcpp to cpp11
- 1y agovalrTest updated for ggplot2 3.6.0
- 1y agovalrread_bigwig() switches to cpp11bigwig; read_gtf() deprecated
- 1y agovalrCRAN Rd link NOTE and maintainer email change
- 2y agocheckhelperTest fixes for roxygen2 changes
- 3y agocheckhelpercheckhelper 0.1.0 - First CRAN Release
Frequently asked questions
What is the difference between checkhelper and valr?
Both compete on the same themes — r-packages — within Infra & APIs. checkhelper is currently shipping more aggressively (velocity 2.5 vs 0.0), with 0 editorial sparks in the last 30 days against 0. See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is checkhelper better than valr?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. checkhelper is currently shipping more aggressively (velocity 2.5 vs 0.0), with 0 editorial sparks in the last 30 days against 0. For your specific use case, the alternatives sections above list other Infra & APIs products to evaluate alongside.
What are the best alternatives to checkhelper?
Top checkhelper alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "checkhelper alternatives" section above for the current picks, or visit /alternatives/checkhelper for the full list with editorial commentary on each.
What are the best alternatives to valr?
Top valr alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "valr alternatives" section above for the current picks, or visit /alternatives/valr for the full list with editorial commentary on each.