humind
The MSNI humanitarian needs framework as code, rewritten and re-broken every year
Comparison · Infra & APIs
campsis vs slendr
A side-by-side editorial comparison of campsis and slendr — release velocity, themes, recent moves, and the top alternatives to consider.
campsis vs slendr: at a glance
What is campsis?
Campsis breaks its API on purpose: snake_case throughout, RxODE compatibility cut loose.
Campsis runs clinical-trial simulations from pharmacometric models, sitting on mrgsolve and rxode2 as interchangeable engines, with the sibling package Campsismod supplying the model object layer. Version 1.9.0 is the release where the suite stops carrying its history: the whole API migrates to snake_case, backward compatibility with the old RxODE package is removed, and result processing is refactored into output functions that can be applied as a collection, with an NCA table the first substantial one. Campsismod made the same snake_case move a week earlier, so this is a suite-wide rename rather than one package's decision.
What is slendr?
Population-genetic simulation in R, opened up to selection and finally easier to install.
slendr specifies spatial and non-spatial population-genetic models in R and simulates them through SLiM or msprime, returning tree sequences that tskit then analyses. Two threads dominate the current releases: keeping in step with fast-moving backends, with SLiM 5.1, pyslim 1.1.0 and Python 3.13 now required, and reducing the setup burden that its Python dependency imposes. Version 1.5.0 adds ephemeral uv-based virtual environments, so init_env(uv = TRUE) can stand in for creating a permanent environment with setup_env().
campsis vs slendr: editorial side-by-side
campsis
3.8INFRA · APIS
Campsis breaks its API on purpose: snake_case throughout, RxODE compatibility cut loose.
◆ Current state
Campsis runs clinical-trial simulations from pharmacometric models, sitting on mrgsolve and rxode2 as interchangeable engines, with the sibling package Campsismod supplying the model object layer. Version 1.9.0 is the release where the suite stops carrying its history: the whole API migrates to snake_case, backward compatibility with the old RxODE package is removed, and result processing is refactored into output functions that can be applied as a collection, with an NCA table the first substantial one. Campsismod made the same snake_case move a week earlier, so this is a suite-wide rename rather than one package's decision.
◆ Where it's heading
The 1.8 and 1.9 releases together describe a package being made drivable from outside R. JSON interfaces arrived first for models in Campsismod 1.3.0 and for datasets in Campsis 1.8.0, then extended to scenarios, settings and study replication; the output side has now been generalised the same way, from fixed result processing to a collection of output functions applied to simulated results. Renaming every function and cutting RxODE loose is the cost of that consolidation, paid in one deliberate breaking release rather than spread across several.
◆ Prediction
With the rename and the RxODE removal behind it, the next releases should restore the rxode2 engine to the test suite, which 1.9.0 removed temporarily, and continue filling out the output-function catalogue beyond NCA. The JSON surface looks like the intended entry point for driving Campsis from outside R, though the entries do not say what is meant to consume it.
slendr
0.0INFRA · APIS
Population-genetic simulation in R, opened up to selection and finally easier to install.
◆ Current state
slendr specifies spatial and non-spatial population-genetic models in R and simulates them through SLiM or msprime, returning tree sequences that tskit then analyses. Two threads dominate the current releases: keeping in step with fast-moving backends, with SLiM 5.1, pyslim 1.1.0 and Python 3.13 now required, and reducing the setup burden that its Python dependency imposes. Version 1.5.0 adds ephemeral uv-based virtual environments, so init_env(uv = TRUE) can stand in for creating a permanent environment with setup_env().
◆ Where it's heading
Since the 1.0.0 release added non-neutral simulation, the work has shifted from capability to friction. A large share of recent notes concerns Python environment handling, conda activation races on Windows, dependency pruning that made shiny optional, and argument names that misled users, as when gene_flow()'s rate argument turned out to mean total ancestry proportion rather than a rate. That is the profile of a package whose scientific surface is settled and whose remaining problems are the ones users actually hit.
◆ Prediction
Expect the uv-based environment path to move from fallback to default once it has proven itself, given the notes already describe an environment variable for making it so. The deprecated rate argument in gene_flow() is explicitly slated for removal in a future major release, which is the clearest signal here of what a 2.0 would contain.
Alternatives to campsis and slendr
Other Infra & APIs products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either campsis or slendr.
inlabru
A Bayesian spatial modelling package rebuilding its foundations one breaking release at a time
afcharts
UK government chart styling in ggplot2, chasing ggplot2 v4 and stretching its palette to five.
coga
A gamma-convolution density package that reached completion in 2018 and has coasted since.
smam
Animal-movement models in R, where new stochastic processes arrive years apart.
baseq
A basic DNA and RNA sequence toolkit that went quiet for three years, then jumped to 2.0.
See all campsis alternatives → · See all slendr alternatives →
Recent activity from campsis and slendr
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 15d agocampsissnake_case across the API; RxODE compatibility removed ⚡
- 1mo agoslendrEphemeral uv Python environments remove the setup step
- 5mo agocampsisJSON arguments reach Dataset, Scenarios and Settings
- 7mo agoslendrgene_flow() separates migration rate from ancestry proportion
- 7mo agocampsisMaintenance release for future package warnings
- 7mo agocampsisJSON import for Campsis datasets
- 9mo agoslendrshiny made optional; SLiM 5.1 and Python 3.13 required
- 1y agoslendrconda activation reverted to a slower but reliable path
- 1y agoslendrBackends raised to SLiM 5.0, tskit 0.6.4 and msprime 1.3.4
- 1y agocampsisDosing gains vectorized compartments and cycle repetition
- 1y agocampsisParameter uncertainty from SIR and bootstrap output
- 1y agoslendrNon-neutral models arrive; slim() interface simplified ⚡
Frequently asked questions
What is the difference between campsis and slendr?
They serve adjacent needs but don't currently overlap on shipped themes. campsis is currently shipping more aggressively (velocity 3.8 vs 0.0), with 1 editorial sparks in the last 30 days against 0. See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is campsis better than slendr?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. campsis is currently shipping more aggressively (velocity 3.8 vs 0.0), with 1 editorial sparks in the last 30 days against 0. For your specific use case, the alternatives sections above list other Infra & APIs products to evaluate alongside.
What are the best alternatives to campsis?
Top campsis alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "campsis alternatives" section above for the current picks, or visit /alternatives/campsis for the full list with editorial commentary on each.
What are the best alternatives to slendr?
Top slendr alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "slendr alternatives" section above for the current picks, or visit /alternatives/slendr for the full list with editorial commentary on each.