paleobuddy
paleobuddy can now simulate trait-dependent diversification, not just birth-death.
A side-by-side editorial comparison of cairo and vegan — release velocity, themes, recent moves, and the top alternatives to consider.
Cairo finally catches R's graphics engine, all the way to GE API 16.
Cairo is the R device that renders plots through the cairo library, and until 1.7-0 it lagged R's own graphics engine by several API generations. That release closes the gap to GE API 16 (R 4.5.0), adding fill patterns, masks and groups. The releases before it were maintenance: a segfault shim for grid, a bashism removal in configure, and Windows font and build fixes.
Community ecology's standard toolkit is retiring the functions a generation of scripts was built on.
vegan is the reference R package for ordination and diversity analysis in community ecology. The 2.7 line redesigned constrained ordination graphics from scratch, made adonis defunct in favor of adonis2, and moved permutation tests for partial RDA and db-RDA onto residualized predictors. The current 2.7-5 release is stabilization — parallel processing on Windows, ggvegan compatibility for tidy scores, and arrow label placement.
Cairo is the R device that renders plots through the cairo library, and until 1.7-0 it lagged R's own graphics engine by several API generations. That release closes the gap to GE API 16 (R 4.5.0), adding fill patterns, masks and groups. The releases before it were maintenance: a segfault shim for grid, a bashism removal in configure, and Windows font and build fixes.
The arc is catch-up, executed one API generation at a time. Glyph rendering arrived in 1.6-3, GE 15 stubs in 1.6-5 existed only to stop grid from segfaulting, and 1.7-0 delivers the real GE 13/14/16 feature set rather than placeholders. Alongside that, dropping the CAIROGD_VER C API and the mkdist step means the package now builds with plain R CMD build, which reads as deliberate reduction of maintenance overhead.
Expect the next releases to be corrective rather than additive: the entries show every API adoption here has been followed by a fix release, and patterns, masks and groups are a much larger surface than glyphs were.
vegan is the reference R package for ordination and diversity analysis in community ecology. The 2.7 line redesigned constrained ordination graphics from scratch, made adonis defunct in favor of adonis2, and moved permutation tests for partial RDA and db-RDA onto residualized predictors. The current 2.7-5 release is stabilization — parallel processing on Windows, ggvegan compatibility for tidy scores, and arrow label placement.
Two long deprecation programs are converging. Plotting is being pushed out of the package: lattice functions are deprecated in favor of ggplot2 equivalents now living in ggvegan, a separate CRAN package, while vegan's own base graphics were rebuilt around independently configurable score types and pipe-based construction. Meanwhile the statistical core is being made internally consistent — add1 and drop1 no longer use different internal models, and summary is no longer an accepted route to ordination scores.
Expect the remaining lattice functions to go defunct and more plotting responsibility to shift to ggvegan, leaving vegan as the statistical engine with a thin base graphics layer.
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either cairo or vegan.
paleobuddy can now simulate trait-dependent diversification, not just birth-death.
geodist stays dependency-free and fast, and warns you when 'cheap' distances stop being honest.
errors keeps making uncertainty print the way each scientific field expects.
CMAQ went global in v5.5, and has been patching that surface ever since.
enpls has not changed its statistics since 2016 — only its website, twice.
grex is a lookup table with a version number — it ships when the annotation moves.
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
They serve adjacent needs but don't currently overlap on shipped themes. cairo and vegan are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. cairo and vegan are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
Top cairo alternatives in Analytics are ranked by recent ship velocity. Browse the "cairo alternatives" section above for the current picks, or visit /alternatives/cairo-r for the full list with editorial commentary on each.
Top vegan alternatives in Analytics are ranked by recent ship velocity. Browse the "vegan alternatives" section above for the current picks, or visit /alternatives/vegan-r for the full list with editorial commentary on each.