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Comparison · Infra & APIs
bolasso vs rgm
A side-by-side editorial comparison of bolasso and rgm — release velocity, themes, recent moves, and the top alternatives to consider.
Shared themes:r-package
bolasso vs rgm: at a glance
What is bolasso?
Bootstrap lasso got a fast mode, a second selection rule, and multinomial support
bolasso implements the bootstrapped lasso, refitting a regularized regression across bootstrap replicates and selecting variables by how consistently they survive. The 0.3.0 release reshaped it: a fast argument computes one cross-validated lambda on the full dataset instead of cross-validating inside every replicate, and selected_variables() gained a choice between the variable inclusion probability rule and a quantile rule based on bootstrap confidence intervals. Since then 0.4.0 exposed the bootstrap indices through bootstrap_samples(), and 0.5.0 extended the whole surface to multinomial responses, returning one list element per outcome level.
What is rgm?
A microbiome network model that got itself un-archived by deleting the dependency that killed it.
rgm implements the random graphical model for microbiome interactions across related environments, published in JABES in 2026. The package was archived from CRAN in February 2026 because of its dependency on huge; the recovery release drops that dependency entirely, which cost it the graphical-lasso warm start that used to seed the initial graph — the default is now an empty graph, with warm starts left to the user. A post-processing function returning ggplot diagnostics arrived in the same release.
bolasso vs rgm: editorial side-by-side
bolasso
0.0INFRA · APIS
Bootstrap lasso got a fast mode, a second selection rule, and multinomial support
◆ Current state
bolasso implements the bootstrapped lasso, refitting a regularized regression across bootstrap replicates and selecting variables by how consistently they survive. The 0.3.0 release reshaped it: a fast argument computes one cross-validated lambda on the full dataset instead of cross-validating inside every replicate, and selected_variables() gained a choice between the variable inclusion probability rule and a quantile rule based on bootstrap confidence intervals. Since then 0.4.0 exposed the bootstrap indices through bootstrap_samples(), and 0.5.0 extended the whole surface to multinomial responses, returning one list element per outcome level.
◆ Where it's heading
The package spent 2022 dormant after its initial releases and has been actively developed since late 2024, moving from a single algorithm toward a workbench. The additions cluster around inspection rather than estimation: tidy() for bootstrap-level coefficients, plot_selection_thresholds() for selection stability across thresholds, plot_selected_variables() for the surviving covariates, and now the extracted bootstrap indices. Documented gaps remain, with mgaussian unsupported and multinomial prediction limited to class output.
◆ Prediction
The two stated limitations in 0.5.0 - no mgaussian family and class-only multinomial prediction - are the most likely next targets, since the maintainer flagged both as possible later additions.
rgm
0.0INFRA · APIS
A microbiome network model that got itself un-archived by deleting the dependency that killed it.
◆ Current state
rgm implements the random graphical model for microbiome interactions across related environments, published in JABES in 2026. The package was archived from CRAN in February 2026 because of its dependency on huge; the recovery release drops that dependency entirely, which cost it the graphical-lasso warm start that used to seed the initial graph — the default is now an empty graph, with warm starts left to the user. A post-processing function returning ggplot diagnostics arrived in the same release.
◆ Where it's heading
Three tags shipped inside two hours on one day, and the notes are candid about why: 1.1.0 held the actual work but was never released, 1.2.0 restated it under a higher version to signal the size of the change, and 1.2.1 answered CRAN pre-test feedback. Beyond the archival recovery, the visible work is housekeeping that had accumulated — a shadowed rmvnorm() definition, roxygen import tags that were silently emitting nothing, leftover C++ template scaffolding, and build artifacts under version control. The diagnostics function is the only genuinely new user-facing capability in the window.
◆ Prediction
The immediate task was restoring availability, and that is done; the open question the entries raise is whether losing the graphical-lasso warm start affects convergence in practice, which the new diagnostic plots are positioned to answer.
Alternatives to bolasso and rgm
Other Infra & APIs products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either bolasso or rgm.
WPML
WPML made machine translation the default, and its point releases keep chasing WordPress and page builders.
forestploter
A forest plot package that keeps handing users control of one more graphical detail.
ggInterval
Interval-valued data plotting, spending 2026 making its function names and examples survive CRAN.
contagionchannels
Three releases in ten days, every one of them a CRAN reviewer's correction rather than a code change.
tidyaudit
Pipeline provenance for tidyverse workflows, recording what changed at each step without keeping the data.
Recent activity from bolasso and rgm
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 3mo agorgmJournal DOI replaces the preprint; promotional wording removed
- 3mo agorgmBack on CRAN after dropping the dependency that caused archival
- 3mo agorgmUnreleased twin of the CRAN recovery release
- 4mo agobolassoMultinomial responses supported across selection and plotting
- 10mo agobolassoBootstrap indices exposed via bootstrap_samples()
- 1y agobolassoFast estimation mode and a second variable selection rule ⚡
- 2y agorgmFirst release: simulation, estimation and post-processing
- 4y agobolassoBolasso v0.2.0
- 4y agobolassoBolasso v0.1.0
Frequently asked questions
What is the difference between bolasso and rgm?
Both compete on the same themes — r-package — within Infra & APIs. bolasso and rgm are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is bolasso better than rgm?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. bolasso and rgm are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Infra & APIs products to evaluate alongside.
What are the best alternatives to bolasso?
Top bolasso alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "bolasso alternatives" section above for the current picks, or visit /alternatives/bolasso for the full list with editorial commentary on each.
What are the best alternatives to rgm?
Top rgm alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "rgm alternatives" section above for the current picks, or visit /alternatives/rgm for the full list with editorial commentary on each.