paleobuddy
paleobuddy can now simulate trait-dependent diversification, not just birth-death.
Comparison · Analytics
bittermelon vs EvoPhylo
A side-by-side editorial comparison of bittermelon and EvoPhylo — release velocity, themes, recent moves, and the top alternatives to consider.
bittermelon vs EvoPhylo: at a glance
What is bittermelon?
bittermelon is growing from binary bitmaps toward greyscale and color glyphs
The package manipulates bitmap fonts and bitmaps in R, and the recent direction is widening what a glyph can be. v2.3.1 adds greyscale font support by reading the experimental yaff levels property into pixmap glyphs with alpha derived from the level fraction, and makes writing a multi-colored glyph an error rather than silently clamping it. Earlier releases built out the same surface: bm_extract(), an interactive pixel picker, data frame coercion, and format support for other packages' bitmap types.
What is EvoPhylo?
EvoPhylo added BEAST2 alongside MrBayes, then went quiet for two years.
EvoPhylo handles post-processing for Bayesian evolutionary rate and fossilized birth-death analyses, originally against MrBayes output. The 0.3.2 release added BEAST2 support for both FBD functions and rates analysis, making it usable by labs on either platform. Since then there has been one clock-partition fix and, in August 2025, a release whose notes say only that there are updated functions and bug fixes.
bittermelon vs EvoPhylo: editorial side-by-side
bittermelon
0.0ANALYTICS
bittermelon is growing from binary bitmaps toward greyscale and color glyphs
◆ Current state
The package manipulates bitmap fonts and bitmaps in R, and the recent direction is widening what a glyph can be. v2.3.1 adds greyscale font support by reading the experimental yaff levels property into pixmap glyphs with alpha derived from the level fraction, and makes writing a multi-colored glyph an error rather than silently clamping it. Earlier releases built out the same surface: bm_extract(), an interactive pixel picker, data frame coercion, and format support for other packages' bitmap types.
◆ Where it's heading
Two things are converging. The representation is moving beyond one-bit glyphs — pixmaps, color, and now greyscale levels with transparency — while the API gets stricter about the boundary between them, refusing to quietly downcast a color glyph on write. Separately, the package has been shedding weight: the embedded monobit copy was removed once it outgrew CRAN size limits, pushing format breadth onto a user-installed dependency.
◆ Prediction
Expect further greyscale and color work now that levels parsing exists — most likely writing that format rather than only reading it, since the write path is where the current release chose to draw a hard error instead.
EvoPhylo
0.0ANALYTICS
EvoPhylo added BEAST2 alongside MrBayes, then went quiet for two years.
◆ Current state
EvoPhylo handles post-processing for Bayesian evolutionary rate and fossilized birth-death analyses, originally against MrBayes output. The 0.3.2 release added BEAST2 support for both FBD functions and rates analysis, making it usable by labs on either platform. Since then there has been one clock-partition fix and, in August 2025, a release whose notes say only that there are updated functions and bug fixes.
◆ Where it's heading
The package's substantive arc ended with the 0.3.2 publication release, which arrived with peer-review revisions and three first-time contributors — the shape of software built to accompany a paper. What follows is thin: a MrBayes plotting correction in 0.3.3, then a two-year gap and a release with no described contents. The August 2025 entry may contain real work, but the notes give a reader nothing to judge.
◆ Prediction
Without release notes on the latest version there is no observable basis for predicting the next move; the two-year gap before it suggests activity tied to specific research needs rather than a maintenance cadence.
Alternatives to bittermelon and EvoPhylo
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either bittermelon or EvoPhylo.
geodist
geodist stays dependency-free and fast, and warns you when 'cheap' distances stop being honest.
errors
errors keeps making uncertainty print the way each scientific field expects.
CMAQ
CMAQ went global in v5.5, and has been patching that surface ever since.
enpls
enpls has not changed its statistics since 2016 — only its website, twice.
grex
grex is a lookup table with a version number — it ships when the annotation moves.
See all bittermelon alternatives → · See all EvoPhylo alternatives →
Recent activity from bittermelon and EvoPhylo
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 4mo agobittermelonGreyscale font reading arrives; color glyphs no longer clamp silently
- 6mo agobittermelonBitmap extraction and a supported-format predicate
- 11mo agoEvoPhyloEvoPhylo v. 0.3.5
- 1y agobittermelonData frame coercion and an interactive pixel picker
- 2y agobittermelonEmbedded monobit removed; broader format support now needs a manual install
- 2y agobittermelonCombining-character test fixed after a Unicode package change
- 3y agoEvoPhyloEvoPhylo 0.3.3 fixes back-rate plots for MrBayes
- 3y agoEvoPhyloEvoPhylo 0.3.2 adds BEAST2 support for FBD and rates
- 3y agobittermelonHex fonts can be read selectively by code point
Frequently asked questions
What is the difference between bittermelon and EvoPhylo?
They serve adjacent needs but don't currently overlap on shipped themes. bittermelon and EvoPhylo are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is bittermelon better than EvoPhylo?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. bittermelon and EvoPhylo are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to bittermelon?
Top bittermelon alternatives in Analytics are ranked by recent ship velocity. Browse the "bittermelon alternatives" section above for the current picks, or visit /alternatives/bittermelon-r for the full list with editorial commentary on each.
What are the best alternatives to EvoPhylo?
Top EvoPhylo alternatives in Analytics are ranked by recent ship velocity. Browse the "EvoPhylo alternatives" section above for the current picks, or visit /alternatives/evophylo for the full list with editorial commentary on each.