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Comparison · Analytics
b3gbi vs susier
A side-by-side editorial comparison of b3gbi and susier — release velocity, themes, recent moves, and the top alternatives to consider.
b3gbi vs susier: at a glance
What is b3gbi?
b3gbi pulled confidence intervals out of its indicator workflow and handed them to dubicube.
b3gbi computes biodiversity indicators from GBIF occurrence cubes for the B-Cubed project, and sits at 0.9.4 in a JOSS review run-up. The 0.9 release decoupled uncertainty from indicator calculation: confidence intervals are no longer produced inline but added afterward with add_ci(), backed by whole-cube bootstrapping from the sibling dubicube package. Everything since has been grid-parsing and compatibility repair around that split.
What is susier?
Fine-mapping workhorse susieR spends its releases hunting null-effect trimming bugs
susieR implements the Sum of Single Effects regression model for variable selection and fine-mapping, widely used in statistical genetics. The recent releases are a tight run of correctness work concentrated in one area: null effect trimming. Version 0.15.55 fixed trimming under the Servin-Stephens residual variance method, 0.15.56 fixed it again for non-uniform prior weights fourteen minutes later, 0.15.57 corrected an ELBO null space term for RSS with X and a matrix symmetry check, and 0.15.58 addressed an alpha0/beta0 issue. Version 0.16.0 migrates the C++ bindings from Rcpp to cpp11 with cpp11armadillo.
b3gbi vs susier: editorial side-by-side
b3gbi
2.5ANALYTICS
b3gbi pulled confidence intervals out of its indicator workflow and handed them to dubicube.
◆ Current state
b3gbi computes biodiversity indicators from GBIF occurrence cubes for the B-Cubed project, and sits at 0.9.4 in a JOSS review run-up. The 0.9 release decoupled uncertainty from indicator calculation: confidence intervals are no longer produced inline but added afterward with add_ci(), backed by whole-cube bootstrapping from the sibling dubicube package. Everything since has been grid-parsing and compatibility repair around that split.
◆ Where it's heading
Two forces are shaping releases. Internally, the uncertainty split produced an indicator-specific rule book — species-level indicators bootstrap the whole cube, raw counts resample within year, evenness gets a logit transform — and that rule book is where the statistical thinking now lives. Externally, GBIF's taxonomic backbone migration to the Catalogue of Life forced string taxon keys through process_cube() and the plotting paths, while recurring EEA and MGRS grid-code fixes mark coordinate parsing as the least settled area.
◆ Prediction
The 0.9.4 notes are entirely JOSS review items — contributors, examples, tracked datasets — so the next release is most likely a JOSS-accepted 1.0 rather than new indicator work.
susier
0.0ANALYTICS
Fine-mapping workhorse susieR spends its releases hunting null-effect trimming bugs
◆ Current state
susieR implements the Sum of Single Effects regression model for variable selection and fine-mapping, widely used in statistical genetics. The recent releases are a tight run of correctness work concentrated in one area: null effect trimming. Version 0.15.55 fixed trimming under the Servin-Stephens residual variance method, 0.15.56 fixed it again for non-uniform prior weights fourteen minutes later, 0.15.57 corrected an ELBO null space term for RSS with X and a matrix symmetry check, and 0.15.58 addressed an alpha0/beta0 issue. Version 0.16.0 migrates the C++ bindings from Rcpp to cpp11 with cpp11armadillo.
◆ Where it's heading
The version-number churn understates how narrow this work is — four consecutive releases touching the same trimming and residual-variance machinery suggests one area where the implementation and the intended behavior had drifted apart. The 0.16.0 binding migration is the only structural change, and it is invisible to users while mattering for build portability and long-term maintenance. Development is clearly active, with automated release tooling and dependency bumps flowing through the same stream.
◆ Prediction
With the binding migration just landed, near-term releases are likely to address fallout from it alongside continued fixes in the same trimming and residual-variance code.
Alternatives to b3gbi and susier
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either b3gbi or susier.
gcube
gcube's recent releases are all packaging metadata, not simulation code
cubist
The R port of Quinlan's Cubist gets reproducibility fixes, not new modelling
ggstats
ggstats keeps widening what a coefficient or Likert plot can be
ecodive
ecodive rebuilt itself into a broad diversity-metric library, breaking as it went
simStateSpace
State-space data simulation for R, filled in one function at a time
See all b3gbi alternatives → · See all susier alternatives →
Recent activity from b3gbi and susier
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 4d agob3gbiJOSS review fixes: contributors, examples, tracked data
- 1mo agob3gbiEEA grid coordinates no longer scaled by resolution
- 1mo agob3gbiadd_ci() no longer crashes on completeness indicators
- 1mo agob3gbiString taxon keys for GBIF's Catalogue of Life backbone
- 1mo agob3gbiUncertainty split out of the indicator workflow into add_ci() ⚡
- 1mo agob3gbiFAIR column mapping doc and Zenodo DOI badge
- 3mo agosusierMigrates C++ bindings from Rcpp to cpp11 and cpp11armadillo
- 3mo agosusierFixes alpha0/beta0 handling under Servin-Stephens
- 4mo agosusierCorrects the null space ELBO term for RSS with X
- 5mo agosusierFixes null effect trimming with non-uniform prior weights
- 5mo agosusierFixes null effect trimming under Servin-Stephens estimation
Frequently asked questions
What is the difference between b3gbi and susier?
They serve adjacent needs but don't currently overlap on shipped themes. b3gbi is currently shipping more aggressively (velocity 2.5 vs 0.0), with 0 editorial sparks in the last 30 days against 0. See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is b3gbi better than susier?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. b3gbi is currently shipping more aggressively (velocity 2.5 vs 0.0), with 0 editorial sparks in the last 30 days against 0. For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to b3gbi?
Top b3gbi alternatives in Analytics are ranked by recent ship velocity. Browse the "b3gbi alternatives" section above for the current picks, or visit /alternatives/b3gbi for the full list with editorial commentary on each.
What are the best alternatives to susier?
Top susier alternatives in Analytics are ranked by recent ship velocity. Browse the "susier alternatives" section above for the current picks, or visit /alternatives/susier for the full list with editorial commentary on each.