STACAS
Single-cell batch correction that learned to use cell labels, then spent three releases chasing Seurat.
Comparison · Analytics
b3gbi vs rtrek
A side-by-side editorial comparison of b3gbi and rtrek — release velocity, themes, recent moves, and the top alternatives to consider.
b3gbi vs rtrek: at a glance
What is b3gbi?
b3gbi pulled confidence intervals out of its indicator workflow and handed them to dubicube.
b3gbi computes biodiversity indicators from GBIF occurrence cubes for the B-Cubed project, and sits at 0.9.4 in a JOSS review run-up. The 0.9 release decoupled uncertainty from indicator calculation: confidence intervals are no longer produced inline but added afterward with add_ci(), backed by whole-cube bootstrapping from the sibling dubicube package. Everything since has been grid-parsing and compatibility repair around that split.
What is rtrek?
A Star Trek data package that became a Memory Alpha web client and has been patching scrapers ever since.
rtrek bundles Star Trek datasets — book series, timelines, episode transcripts, species and homeworlds, map tile sets — and layers live retrieval on top through memory_alpha() and memory_beta() plus their ma_* and mb_* helpers. Recent releases are almost entirely repairs to that retrieval layer as the source wikis change their page structure.
b3gbi vs rtrek: editorial side-by-side
b3gbi
2.5ANALYTICS
b3gbi pulled confidence intervals out of its indicator workflow and handed them to dubicube.
◆ Current state
b3gbi computes biodiversity indicators from GBIF occurrence cubes for the B-Cubed project, and sits at 0.9.4 in a JOSS review run-up. The 0.9 release decoupled uncertainty from indicator calculation: confidence intervals are no longer produced inline but added afterward with add_ci(), backed by whole-cube bootstrapping from the sibling dubicube package. Everything since has been grid-parsing and compatibility repair around that split.
◆ Where it's heading
Two forces are shaping releases. Internally, the uncertainty split produced an indicator-specific rule book — species-level indicators bootstrap the whole cube, raw counts resample within year, evenness gets a logit transform — and that rule book is where the statistical thinking now lives. Externally, GBIF's taxonomic backbone migration to the Catalogue of Life forced string taxon keys through process_cube() and the plotting paths, while recurring EEA and MGRS grid-code fixes mark coordinate parsing as the least settled area.
◆ Prediction
The 0.9.4 notes are entirely JOSS review items — contributors, examples, tracked datasets — so the next release is most likely a JOSS-accepted 1.0 rather than new indicator work.
rtrek
0.0ANALYTICS
A Star Trek data package that became a Memory Alpha web client and has been patching scrapers ever since.
◆ Current state
rtrek bundles Star Trek datasets — book series, timelines, episode transcripts, species and homeworlds, map tile sets — and layers live retrieval on top through memory_alpha() and memory_beta() plus their ma_* and mb_* helpers. Recent releases are almost entirely repairs to that retrieval layer as the source wikis change their page structure.
◆ Where it's heading
The package's centre of gravity shifted once, at 0.2.0, from shipping static data to querying Memory Alpha and Memory Beta at runtime. Everything since has been the maintenance bill for that decision: HTML update fixes, parser improvements, portal retrieval bugs. Note that version numbers on this feed do not track time — 0.2.5 is stamped a year before 0.1.0, and three tags were backfilled within four minutes in November 2020 — so neither rank nor version ordering here indicates release sequence.
◆ Prediction
Expect the next release to fix retrieval against another Memory Alpha layout change, which is what the last four have done. The entries give no indication of new datasets or functions in progress.
Alternatives to b3gbi and rtrek
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either b3gbi or rtrek.
ggtrace
A debugger for ggplot2's internals, hardening its grip as the internals it traces keep moving.
kde1d
A univariate density estimator that added zero-inflated data and reopened its C++ API to do it.
svines
Stationary vine copulas for time series, released in lockstep with the rest of Nagler's vine stack.
gghighlight
A single-purpose ggplot2 extension that has spent six years tracking ggplot2 instead of growing.
eiaapi
A thin EIA energy-data client whose whole story is making bulk queries survive the API's limits.
Recent activity from b3gbi and rtrek
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 4d agob3gbiJOSS review fixes: contributors, examples, tracked data
- 1mo agob3gbiEEA grid coordinates no longer scaled by resolution
- 1mo agob3gbiadd_ci() no longer crashes on completeness indicators
- 1mo agob3gbiString taxon keys for GBIF's Catalogue of Life backbone
- 1mo agob3gbiUncertainty split out of the indicator workflow into add_ci() ⚡
- 1mo agob3gbiFAIR column mapping doc and Zenodo DOI badge
- 1y agortrekMemory Alpha series portal retrieval fix
- 1y agortrekrtrek 0.5.1 release
- 2y agortrekParser improvements for wiki retrieval
- 2y agortrekDead external content and data dependencies removed
- 5y agortrekFixes for source website HTML changes
- 5y agortrekMemory Alpha and Memory Beta web APIs added ⚡
Frequently asked questions
What is the difference between b3gbi and rtrek?
They serve adjacent needs but don't currently overlap on shipped themes. b3gbi is currently shipping more aggressively (velocity 2.5 vs 0.0), with 0 editorial sparks in the last 30 days against 0. See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is b3gbi better than rtrek?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. b3gbi is currently shipping more aggressively (velocity 2.5 vs 0.0), with 0 editorial sparks in the last 30 days against 0. For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to b3gbi?
Top b3gbi alternatives in Analytics are ranked by recent ship velocity. Browse the "b3gbi alternatives" section above for the current picks, or visit /alternatives/b3gbi for the full list with editorial commentary on each.
What are the best alternatives to rtrek?
Top rtrek alternatives in Analytics are ranked by recent ship velocity. Browse the "rtrek alternatives" section above for the current picks, or visit /alternatives/rtrek for the full list with editorial commentary on each.