qqman
The Manhattan-plot package for GWAS results, finished and dormant since 2017.
Comparison · Analytics
austraits vs spmodel
A side-by-side editorial comparison of austraits and spmodel — release velocity, themes, recent moves, and the top alternatives to consider.
austraits vs spmodel: at a glance
What is austraits?
The R client for AusTraits spends its releases chasing the dataset it reads.
austraits is the R access layer for the AusTraits plant trait database, and its release history is almost entirely a record of keeping pace with two upstream systems it does not control: the austraits.build data releases and the Zenodo archive that hosts them. The most recent release adds a version-dispatch layer so the same package can read both v4.x and v5.0.0 data. Three of the four visible tags were backfilled to GitHub within 23 minutes of each other, so version order and publication order do not agree.
What is spmodel?
Spatial regression in R, adding block kriging and then tuning the numerics underneath it
spmodel fits spatial linear and generalised linear models, for both point-referenced and areal data, with prediction and diagnostics attached. Block prediction arrived in 0.11.0 and the releases since have refined it. The most recent release changes optimiser behaviour: the default Nelder-Mead relative stopping tolerance tightens from 1e-4 to 1e-6 to reduce convergence on local rather than global maxima.
austraits vs spmodel: editorial side-by-side
austraits
0.0ANALYTICS
The R client for AusTraits spends its releases chasing the dataset it reads.
◆ Current state
austraits is the R access layer for the AusTraits plant trait database, and its release history is almost entirely a record of keeping pace with two upstream systems it does not control: the austraits.build data releases and the Zenodo archive that hosts them. The most recent release adds a version-dispatch layer so the same package can read both v4.x and v5.0.0 data. Three of the four visible tags were backfilled to GitHub within 23 minutes of each other, so version order and publication order do not agree.
◆ Where it's heading
The package is converging on a stable public vocabulary and a versioned internal. Sites became locations across every join, plot and extract function; the extract_ and print family filled out at 1.0.0; and by 2.2.2 the core functions each carry a switch on the detected data version rather than assuming one schema. The visible cost of that is dependency churn — plotting packages moved to Suggests, which the notes admit can leave core functions unable to run.
◆ Prediction
Given that every release so far has been triggered by an upstream austraits.build or Zenodo change, the next one most likely follows the next data release rather than any independent roadmap. The entries do not indicate new analysis capability being planned in the client itself.
spmodel
0.0ANALYTICS
Spatial regression in R, adding block kriging and then tuning the numerics underneath it
◆ Current state
spmodel fits spatial linear and generalised linear models, for both point-referenced and areal data, with prediction and diagnostics attached. Block prediction arrived in 0.11.0 and the releases since have refined it. The most recent release changes optimiser behaviour: the default Nelder-Mead relative stopping tolerance tightens from 1e-4 to 1e-6 to reduce convergence on local rather than global maxima.
◆ Where it's heading
Two threads run in parallel. The first is expanding what can be predicted — point predictions, then areal averages over a region via block kriging, then better accuracy and efficiency for that path as the block size default moved from 1000 to 4000 in 0.12.0. The second is numerical trustworthiness, and it is unusually prominent here: a range-constraint option for stability in 0.9.0, a corrected log determinant of the fixed effects in the restricted log likelihood in 0.11.0, a cloud semivariogram that had been doubling the semivariance fixed in 0.11.1, and now a tighter optimiser tolerance. Several of these silently changed results before they were caught.
◆ Prediction
Expect the maintainers to keep publishing explicit reproduction instructions alongside numerical default changes, as 0.13.0 does by documenting the `control = list(reltol = 1e-4)` escape hatch. The entries give no signal of expansion beyond the current model families.
Alternatives to austraits and spmodel
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either austraits or spmodel.
constants
The R package for CODATA constants rebuilt its symbol table on NIST's naming so future updates stop being hand work.
ggdemetra
A ggplot2 layer for seasonal adjustment output, filling in one plot type at a time.
fossilsim
A fossil-record simulator that quietly grew a trait-evolution engine.
tern.rbmi
Reference-based multiple imputation tables, shipping only what CRAN checks demand.
tern.mmrm
An MMRM tabulation package that has published nothing since its 2024 CRAN releases.
See all austraits alternatives → · See all spmodel alternatives →
Recent activity from austraits and spmodel
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 2mo agospmodelTighter optimiser tolerance to avoid local maxima
- 6mo agospmodelEmpirical autocovariance function and better block kriging accuracy
- 9mo agospmodelCloud semivariogram doubling fixed; geometry warnings added
- 1y agospmodelBlock kriging for areal averages and their uncertainty ⚡
- 1y agospmodelRobust semivariogram and new covariance types for areal models
- 1y agospmodelRange constraint option and redefined covariance type names
- 2y agoaustraitsSupport for AusTraits 5.0.0 data and the rebuilt Zenodo API
- 3y agoaustraitsextract_taxa, lookup_trait and print methods arrive
- 3y agoaustraitsVignette build and extract_ function polish
- 3y agoaustraitssite becomes location across the API; AusTraits 3.0.2+ support
Frequently asked questions
What is the difference between austraits and spmodel?
They serve adjacent needs but don't currently overlap on shipped themes. austraits and spmodel are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is austraits better than spmodel?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. austraits and spmodel are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to austraits?
Top austraits alternatives in Analytics are ranked by recent ship velocity. Browse the "austraits alternatives" section above for the current picks, or visit /alternatives/austraits-r for the full list with editorial commentary on each.
What are the best alternatives to spmodel?
Top spmodel alternatives in Analytics are ranked by recent ship velocity. Browse the "spmodel alternatives" section above for the current picks, or visit /alternatives/spmodel for the full list with editorial commentary on each.